| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1312 |
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| Symbol | |
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| ID | 8380489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1403707 |
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| End bp | 1405260 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004061 |
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| Product | Fmu (Sun) domain protein |
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| Protein accession | YP_003161271 |
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| Protein GI | 256832544 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.174592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACC GTAATGATCG TTTTCAGGAC CGGGCCCCTC GTGAGCATGG TCACCATCAA
GGGCGTCACC AGGATGGTCA GCGCCGTGAT GATCGTGGCC GTGAGCGCGG CGCGGCGCGT
ATGCGCCAGG CAGGGCATCG CAGTCAGGTA GCACCTTCTC AACGTCGTTC GCGGAGCACA
ACGGCGCGGC AGGTGGCGTT TGAGGTGTTG CGCCAAGTCG CCGACTCTGA TGCGTATGCG
AACTTGGTTT TACCTCCTGC GTTGCGTCGT GCGCGACTTG AGGGGCGAGA CGCAGGGTTT
GCCACAGAGT TAGCGTATGG AACGTTGCGG ATGCGTGGCT TGTATGACGC GATCATTGCT
GCGCACACCA CCCGCCCACT TGAGGACATT GATTCCGCGG TTCTTGACTG TTTGCGGTTG
GGTGTTCACC AGATTGTGTC GATGCGAGTA CCAGCACACG CGGCCGTCTC GGAGACAGTT
GGGGTTGCCC GTGACAACAT TGGTGCAGGT CCCGCCCAGT TCATTAATGC AGTGTTGCGT
TCTATTAGTG AAACTGACAG TGATGAGATC ATGGCTAAGG CCGTTGAGGG TTTGGATGAG
ACACACACAT TAGCGGTTCG TCATTCTCAC CCGGCGTGGG TGGTGCGTGC TTTGCGTGAC
GCGTTGGGTG CGCAGGGGCG TGATCGCTCT GAGATTGTGG CGTTGCTTGA TGCGGATAAC
GCGGCACCGG CTGTCACTCT TGTTGCCCGT CCTGGGTTGT CGGATGCGGA TGAGTTGGTT
GGGTTGATTG AGGACTCAGT GCCTGGGCAG TGGGCACCCA CTGCGGTCAT CATGCCGGGT
ACTGATCCTG CGTCTGTTGA CGATGTTCGT ACTGGTCGGG CGGGTGTTCA GGATGAAGGG
TCTCAACTGG TCACGCTCGC GCTTGTCGAT GCGCCTCTTG AGGGTCGTGA TGAGCGGTGG
CTGGATATGT GCGCTGGACC GGGCGGTAAG GCTGCGTTGC TTGGTGCGTT CGCTGATTTG
CGGCAGGCGC GCCTGGTGGC TAACGAGGTC CAGCCGCACC GCGCTGAGCT TGTGGAAAAG
TCGCTGCGGG CACTTCCGCA AGACGCAATT GAACGTATTC AGGTGTGGGA CGGCCGTGAA
ATTGGGGTCC TCGAGCCAGG AGCGTATGAC CGAATCCTTG TTGATGCACC CTGCACCGGG
TTGGGGGCGT TACGGCGGCG ACCGGAATCT CGTTGGCGGC GTCAAGCTCG CGATGTTGGT
GAACTCTCGC AGATTCAAGA GGACCTTCTC GTGTCCGCGT TGCAGGCTGT GCGTGTCGGG
GGAGTGGTGG CCTATGTGAC ATGTTCCCCG CACATCGGCG AAACACGGGT TGCTGTTGAT
CAGGGAATCA AAAAATTTGG GCCAGACAAC GTGGAACGCC TTGATACCCC CAGCGTTGTG
CGGCAGATTG CCGGTGATTC AATTGATGTT GGTGACTCCA CTGATGTTCA ACTGTGGCCG
CATGTTCACC AGACAGACGC CATGTACCTC GCTCTGCTTC GACGCATCGG ATAA
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| Protein sequence | MADRNDRFQD RAPREHGHHQ GRHQDGQRRD DRGRERGAAR MRQAGHRSQV APSQRRSRST
TARQVAFEVL RQVADSDAYA NLVLPPALRR ARLEGRDAGF ATELAYGTLR MRGLYDAIIA
AHTTRPLEDI DSAVLDCLRL GVHQIVSMRV PAHAAVSETV GVARDNIGAG PAQFINAVLR
SISETDSDEI MAKAVEGLDE THTLAVRHSH PAWVVRALRD ALGAQGRDRS EIVALLDADN
AAPAVTLVAR PGLSDADELV GLIEDSVPGQ WAPTAVIMPG TDPASVDDVR TGRAGVQDEG
SQLVTLALVD APLEGRDERW LDMCAGPGGK AALLGAFADL RQARLVANEV QPHRAELVEK
SLRALPQDAI ERIQVWDGRE IGVLEPGAYD RILVDAPCTG LGALRRRPES RWRRQARDVG
ELSQIQEDLL VSALQAVRVG GVVAYVTCSP HIGETRVAVD QGIKKFGPDN VERLDTPSVV
RQIAGDSIDV GDSTDVQLWP HVHQTDAMYL ALLRRIG
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