| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1311 |
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| Symbol | |
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| ID | 8380488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1402975 |
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| End bp | 1403697 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645004060 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_003161270 |
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| Protein GI | 256832543 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.397284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.294333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATTC AGATCGCCCC GTCGATCCTG TCCGCCGATT ATGCCAACCT GGAGTCCGAG
CTTCACCGAA TCACTGAGGC TGACTGGGTG CATGTTGATG TGATGGACAA TCATTTCGTC
CCGAACCTCA CCTGGGGTTT ACCGGTTGTG GAACGTATCG CGCAGGTGTC ACCTCTTCCG
TTAGACACTC ACCTCATGAT TGACAATGCT GACCGTTGGG CGCCTCAGTA CGCTGAAGCG
GGATCACACT CAGTGACCTT TCACGCTGAG GCGACACAAG CCCCTGTTCG GTTAGCCAGG
GAACTGCGGC GCCAGGGCGC CCGTGCTGGA ATCGCACTGC GACCGGCAAC GGGCATCGAA
CCTTACCTTG ATTTGCTCCC AGAATTTGAC ATGGTCCTCA TCATGACTGT GGAACCTGGG
TTTGGTGGTC AATCTTTCAT TGAGTCGATG GTCCACAAAA TTCGTCGCAC CCGTGCAGCA
ATCGATGCTA ATCAGCTGGA TGTGTGGGTT CAGGTTGACG GTGGTATATC CGAGAAGACC
ATTGACCAAG CTGCTGATGC TGGGGCCAAC GTCTTTGTGG CTGGGTCAGC TGTGTTCAAC
GCGGAGGACA TTCCCGCGCA GATTACTACT TTGCGTTCGC TGGCACAGGA CCATTACTGC
GCTCACTCCT CGCGTCCATC GGCTGGTCAC AACGAACCAC ACCCACCTCA CCACGTAAAG
TAG
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| Protein sequence | MSIQIAPSIL SADYANLESE LHRITEADWV HVDVMDNHFV PNLTWGLPVV ERIAQVSPLP
LDTHLMIDNA DRWAPQYAEA GSHSVTFHAE ATQAPVRLAR ELRRQGARAG IALRPATGIE
PYLDLLPEFD MVLIMTVEPG FGGQSFIESM VHKIRRTRAA IDANQLDVWV QVDGGISEKT
IDQAADAGAN VFVAGSAVFN AEDIPAQITT LRSLAQDHYC AHSSRPSAGH NEPHPPHHVK
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