| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1307 |
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| Symbol | |
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| ID | 8380484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1399347 |
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| End bp | 1401320 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004056 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003161266 |
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| Protein GI | 256832539 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.398232 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.396333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATGA GTGTTCAGTT CAGTTCTGAG CACTGTTCAC ACGTGTGCCA CGACCATGTT
TCTCAAAACG AAGGCACTTC ACTCGTGACT GACCAACTTG ACACACACAC CACTGCACCT
GCCTCCCCTG TTGACACCGC AGAACTCACA TTTGCTGACC TGAACCTCCC CAACCAAATT
CAACGCGCAG TTGATGACCT TGGCTTCACG GTGCCCTCCA AAATCCAGCA ACAAGCAATC
CCCGTCCTCT TTGAAGGCCG CGACATCACC GGTATCGCCC AAACCGGTAC TGGAAAAACC
GCAGCATTCG GCATCCCACT ACTTGCCAGC ATCGACACCT CAGTACGGCA AGTACAAGCC
CTCGTCTTGG CGCCTACCCG TGAGCTCGCC ATCCAAGTAT CAGAGGCAAT TGAGTCCTTT
GCCCGCCACA TGCCAGGTTT GGAAACCCTC GCCGTCTACG GCGGATCTCC CTACCCTCCC
CAAATTCGCG CCCTCAAAAC AGGGGTTCAC GTGGTTGTGG GAACACCCGG GCGCGTCATC
GACCACATCG AACGAGGCAC CCTCGACCTG TCACAGGTTC GATTCCTCGT CCTTGACGAA
GCAGACGAAA TGCTGCGCAT GGGGTTTGCA GACGACGTAG AGAAAGTCTT CTCAGAAACA
CCTGCGGATC GCCAAGTCGC CCTGTTTTCT GCCACGATGC CCCCTGCCAT CCGCCGAGTT
GCGCAACGAC ACCTCACCAA TCCAGTCGAA ATCGCGGTCG CACGTCAATC CACAACCGTC
ACCGCAATCG ACCAGGAATA CGCAGTCGTC CCATTCCGCC ACAAAACCGG TTCGCTCTAC
CGCGTGTTGG CAACCTCAGA CGTCGAAGCC GCCATCGTCT TCTGCCGTAC CCGTGGAGCT
GCTGAAGAAG TGGGAGCTGC ACTCATCGAA CGAGGCGTCT CTGCCGCGAC AATCTCAGGT
GACGTACCAC AAAAAGACCG TGAAAAAATC GTAGAACGTC TCCGCAACGG CCAACTCGAC
GTCCTCGTCG CCACCGACGT TGCCGCACGA GGCCTCGACG TCGACCGCAT CGGACTAGTC
GTCAACTTCG ACATTCCCGG CGAACCAGAA GCATACGTCC ACCGAATCGG ACGCACAGGA
CGCGCGGGCC GTCAAGGACG CGCCCTGTCC TTTATCACCC CAGCCGAACG CGGAAAACTG
CGATCCATCG AACGCACCAT CCGCACAGAA CTCAAAGAAA TTCCCATCCC CTCCCCCGCA
GATGTCTCTG AGCACAAAAT GCGGACGATG CTGACCAACC TTTCCACCCG CATCGAGGCT
GGCCGGTTGT CCATGTACGA ACAACTCATC GACTCCTACC TCGCAGACAG TGAACACTCC
GCAACAACAG TTGCGGCAGC ACTCGCAGCG CTCGCAGTGG GTGACTCTGG CCCTCGGGCA
CGCGCCGACC AAGAAGAGTA CGAACGCCAA GTTGCTGACG AGGCGTCCTC TCGCCGACAA
GCGTCTTCGC GGACACGTGG TGATGACCGC GGCAGGTCAG ATCGTCCAGC TCGGGAACGT
TCCGGTCGCC CGGCGCGTTC ACGTGATGGT GAGGGAACAA CCTACCGTAT TGCAGTGGGT
TACAACGATG GAGCGCAACC ACGCGGCATT GTCGGGGCTC TGACTAATGA AGGTGGTCTT
CGTGGTAGCG ATGTGGGCCG TATCAACATG TTCGCCACCT TCTCGCTCGT AGACATTTCA
GCTGATCTTG ATGAACCGAC GATGGCACGC ATCGCTAAAG CGCGCCTCGG GTCCAAGTCT
CTGCGGATTC GTCTCGATGA TGGTGGGCCA CGTGGGGGAA GCCCCCGCCG TGGCGGCCGT
GATGAATACC GTGACTCGCA CCCAGGCGCA TCCCGCCGTG GTGGACGCTC AGAACGCGGT
GGAGCGCGCC ATGATGGGCA CCGTTCACGT CGTGACCAGC CATCATGGTC ATGA
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| Protein sequence | MIMSVQFSSE HCSHVCHDHV SQNEGTSLVT DQLDTHTTAP ASPVDTAELT FADLNLPNQI
QRAVDDLGFT VPSKIQQQAI PVLFEGRDIT GIAQTGTGKT AAFGIPLLAS IDTSVRQVQA
LVLAPTRELA IQVSEAIESF ARHMPGLETL AVYGGSPYPP QIRALKTGVH VVVGTPGRVI
DHIERGTLDL SQVRFLVLDE ADEMLRMGFA DDVEKVFSET PADRQVALFS ATMPPAIRRV
AQRHLTNPVE IAVARQSTTV TAIDQEYAVV PFRHKTGSLY RVLATSDVEA AIVFCRTRGA
AEEVGAALIE RGVSAATISG DVPQKDREKI VERLRNGQLD VLVATDVAAR GLDVDRIGLV
VNFDIPGEPE AYVHRIGRTG RAGRQGRALS FITPAERGKL RSIERTIRTE LKEIPIPSPA
DVSEHKMRTM LTNLSTRIEA GRLSMYEQLI DSYLADSEHS ATTVAAALAA LAVGDSGPRA
RADQEEYERQ VADEASSRRQ ASSRTRGDDR GRSDRPARER SGRPARSRDG EGTTYRIAVG
YNDGAQPRGI VGALTNEGGL RGSDVGRINM FATFSLVDIS ADLDEPTMAR IAKARLGSKS
LRIRLDDGGP RGGSPRRGGR DEYRDSHPGA SRRGGRSERG GARHDGHRSR RDQPSWS
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