| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1298 |
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| Symbol | |
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| ID | 8380475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1389389 |
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| End bp | 1392787 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004047 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_003161257 |
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| Protein GI | 256832530 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.936184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGAGA AAGTACTCGT CGCGAACCGT GCTGAGATTG CTGTTCGTGC TTTTCGTGCA
GCGTTTGAGA TGGGATCGCG CACTGTTGCG GTTTTCCCTC AAGAAGATCG AAATTCTGAG
CACCGTTTAA AAGCGGATGA GGCCTACCTC ATTGGTGACC CTGGTCAACC TGTTCGTGCT
TACCTCAATA TTGAAGAGAT CATCCGGGTC GCCGAGCTCG CTGGCGCTGA TGCTGTGTAC
CCGGGGTATG GGTTCTTGTC AGAGAATCCT CAGTTTGCGC GCGCGTGCCG CGACAAAGGG
TTGACCTTCG TTGGTCCGCC TGCGGAAGTT CTTGAACTTG CTGGCAACAA GGTAGCCGCA
TTGAAGGCAG CCCGCGAAGC AGGTATTCCC GTGTTGGCGT CAAGTGAACC GTCGTCAGAC
ATTGAGTATT TGATGTCCGC AGCGCACGAG ATCGGTTTCC CCGTCTTCTG CAAGGCGGTT
GCTGGTGGCG GTGGGCGTGG AATGCGTCGT GTGGATCGAC CAGAGGATCT TCAACAGTCT
CTTGAATCGG CGATGCGTGA GGCGGAGGGG GCTTTTGGTG ACCCCACGAT GTTTGTTGAG
CAGGCTGTGT TGCGCCCTCG ACACATCGAG GTGCAAATCC TTGCTGATGG GCAGGGAAAT
GTGGTTCATC TTTTTGAGCG TGATTGTTCG GTGCAGCGTC GTCATCAGAA GGTTATTGAG
ATTGCGCCTG CTCCCAACCT TGACCCTGAT ATTCGTGATG CGCTGTGCCG TGACGCGGTG
AAGTTTGCGA AATCAATTGG TTACCAAAAC GCTGGAACGG TGGAGTTCCT TGTCGATACG
GCGGGGGAGC GTGCTGGTCA GCATGTGTTC ATCGAGATGA ACCCGCGTAT CCAGGTAGAG
CACACGGTCA CTGAAGAGGT CACGGACATC GACCTGGTGT CCTCTCAGAT GCGTATTGCG
GCAGGTGAGT CGCTTGCCGA CCTGGGAATC TCTCAGGAGA CTGTGCAAGT CAACGGTTTT
GCGTTGCAGT CGCGGATTAC GACCGAGGAT CCTGCCAATG GTTTCCGACC GGACACGGGG
CGCATCGTTG CGTATCGTTC ACCGGGTGGA GCTGGTGTGC GTCTCGATGG AGCGACGGCG
ACCGCCGGTT CGCAGATTAC CGGGCACTTT GACTCAATGC TGGTGAAGTT GACGTGTCGT
GGGCGTGACT TCGACACCGC TGTTCGGCGT GCTCGCCGAG CGTTAGCAGA GTTCCGTATT
CGTGGCATTC GGACAAATAT TCCGTTCTTG CAGGCTGTTC TTGCGGACGA TGAGTTTGCT
GCTGGACAGT TGGCAACATC ATTCATTGAT GAGCGTCCTG AGTTGTTGTC TGCTCGTGCT
TCTGCTGACC GGGGCACGAA ACTGTTGCAG TTCTTGGGTG ATGTTACTGT GAACCGCCCG
CATGGGGAAC CATTTGGTGC TGTTGACCCG CAGGTCAAGC TGCCTGAGCT TGATCTGTCG
CACCCAGTTC CAGCGGGTAT GCGCGATAAG TTGTTGGAAC TTGGCCCTGA GGGTTTTGCC
CGTGCGCTTC GTGAGCAGCA GGCTCTCGCA GTGACAGATA CGACGTTCCG TGATGCACAT
CAGTCGTTGT TGGCTACTCG TGTGCGGACA CGTGATCTTC TCAATGTGGC TCCGCATGTT
TCCCGTTTAA CTCCGCAGTT GCTGTCAGTG GAAGCGTGGG GTGGGGCAAC ATATGACGTT
GCTTTGCGGT TCCTTGGTGA GGATCCGTGG AAACGTTTGG AGCAGTTGCG TGAGGCAATG
CCGAACGTTC CGATTCAGAT GTTGTTGCGC GGGCGGAATA CGGTGGGCTA TACCCCGTAT
CCGGCGGAAG TGACAGACGC TTTCGTGGCG GAGGCTGCTG CTACTGGTGT GGATATCTTC
CGCATTTTTG ATGCGCTCAA TGACGTTGAG CAGATGCTGC CTGCTATTGA GGCAGTTCGA
CGCACGGGTA CTGCTGTTGC CGAAGTGGCA TTGTGCTACA CCGGTGATTT GTTGGATCCT
CGGGAAACTC TCTACACGCT GGATTACTAC CTGGACTTGG CGCAGCGGAT CGTTGATGCT
GGTGCGCACA TCATTGGCAT TAAGGACATG GCTGGGCTCT TGCGTCCGGC GGCTGCTGAG
CGGCTGGTGA CTGCACTCCG CGAGCGTTTT GACGTGCCGG TTCATCTGCA CACACATGAC
ACCACCGGCG GTCAGATGGC GACTCTTCTT GCGGCTGCCC GCGCTGGGGT CGATGCTGTT
GACGTGGCTA ACGCTGCGAT GGCAGGTACC ACCTCGCAAC CGCCTTTGTC TGCTTTGGTA
GCAGCTTTTG AGCACACTGA TCGTGACACG GGATTGTCAC TTCGGGCAGT GTGCGACTTG
GAGCCGTACT GGGAAGCGGT GCGTGTCCTT TACCGCCCGT TTGAATCCGG GTTGACTGGG
CCAACTGGGC GTGTCTACAC CCACGAAATC CCCGGTGGTC AACTATCAAA CCTTCGTCAG
CAAGCAGTGG CGCTGGGGTT GTCGGGGCAC TTTGAAGAAA TTGAGGCAAT GTACGCCGCA
GCGGACCGGA TGCTTGGTCG CTTGGTGAAG GTCACCCCAT CGTCCAAGGT GGTTGGTGAC
CTGGCATTGC AACTGGTTGC GCAAGGTGTT GATCCTGCAG AATTTGCGGA GAACCCGCAG
AAGTTCGACA TTCCTGACTC TGTCATCGGA TTCCTTGGTG GCGAGTTGGG TGACCCGCCA
GGGGGGTGGC CGGAACCGTT CCGGTCAAAG GCGCTTGCCG GGCGTTCAGC ACGCCGTGGG
GTGACTCCAC TGACAGAAGA TGATCGCCGA GAGCTTGCAG GTAGCTCACA GGAACGTCGG
AACCGATTGA ACCACTTGCT CTTCCCCGCG CCCACCAAGG AGTACGAACA GGTACAGGAC
AAGTACGGGG ATGTATCAGT TCTTGCTACG AGCGAGTACC TGTATGGTTT GGTCACTGAC
CAAGAGGTGG ACATCCCGTT GGAGAAGGGT GTTCGACTGC TGGTTGGCCT AGAAGCGGTG
GGTGAACCGG ACCCTCAAGG GTTGCGCACG GTCATGTTCA CGCTCAATGG TCAGTTGCGG
CCAATTCAGA TTCGTGATGA GTCAGTAGAG GTTGTTTCTG CTTCTGTGGA GAAGGCTGAG
CCGCATGTTC CCGGTCAAAT CGGTGCTCCG TATGCTGGAT CGGTGACGTT AGCTGTGCAA
GAGGGCCAGA AGGTCGAGCC TGGGCAAACA GTGGCAACTA TTGAGGCGAT GAAGATGGAA
GCGTCCATTA CGACGCCTAT TGCTGGGACT GTGCGCCGTC TTGCCATCGG GCAGGTACAG
CAACTTGAGG GCGGAGACCT CATCCTGGTG ATCGGTTAA
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| Protein sequence | MFEKVLVANR AEIAVRAFRA AFEMGSRTVA VFPQEDRNSE HRLKADEAYL IGDPGQPVRA
YLNIEEIIRV AELAGADAVY PGYGFLSENP QFARACRDKG LTFVGPPAEV LELAGNKVAA
LKAAREAGIP VLASSEPSSD IEYLMSAAHE IGFPVFCKAV AGGGGRGMRR VDRPEDLQQS
LESAMREAEG AFGDPTMFVE QAVLRPRHIE VQILADGQGN VVHLFERDCS VQRRHQKVIE
IAPAPNLDPD IRDALCRDAV KFAKSIGYQN AGTVEFLVDT AGERAGQHVF IEMNPRIQVE
HTVTEEVTDI DLVSSQMRIA AGESLADLGI SQETVQVNGF ALQSRITTED PANGFRPDTG
RIVAYRSPGG AGVRLDGATA TAGSQITGHF DSMLVKLTCR GRDFDTAVRR ARRALAEFRI
RGIRTNIPFL QAVLADDEFA AGQLATSFID ERPELLSARA SADRGTKLLQ FLGDVTVNRP
HGEPFGAVDP QVKLPELDLS HPVPAGMRDK LLELGPEGFA RALREQQALA VTDTTFRDAH
QSLLATRVRT RDLLNVAPHV SRLTPQLLSV EAWGGATYDV ALRFLGEDPW KRLEQLREAM
PNVPIQMLLR GRNTVGYTPY PAEVTDAFVA EAAATGVDIF RIFDALNDVE QMLPAIEAVR
RTGTAVAEVA LCYTGDLLDP RETLYTLDYY LDLAQRIVDA GAHIIGIKDM AGLLRPAAAE
RLVTALRERF DVPVHLHTHD TTGGQMATLL AAARAGVDAV DVANAAMAGT TSQPPLSALV
AAFEHTDRDT GLSLRAVCDL EPYWEAVRVL YRPFESGLTG PTGRVYTHEI PGGQLSNLRQ
QAVALGLSGH FEEIEAMYAA ADRMLGRLVK VTPSSKVVGD LALQLVAQGV DPAEFAENPQ
KFDIPDSVIG FLGGELGDPP GGWPEPFRSK ALAGRSARRG VTPLTEDDRR ELAGSSQERR
NRLNHLLFPA PTKEYEQVQD KYGDVSVLAT SEYLYGLVTD QEVDIPLEKG VRLLVGLEAV
GEPDPQGLRT VMFTLNGQLR PIQIRDESVE VVSASVEKAE PHVPGQIGAP YAGSVTLAVQ
EGQKVEPGQT VATIEAMKME ASITTPIAGT VRRLAIGQVQ QLEGGDLILV IG
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