| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1297 |
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| Symbol | |
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| ID | 8380474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1387952 |
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| End bp | 1389313 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645004046 |
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| Product | phospholipase D/Transphosphatidylase |
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| Protein accession | YP_003161256 |
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| Protein GI | 256832529 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.641599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.671013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGACA TGTGGCCGGA GGAGGACTGC GTCAGATCAC AGCGCGATGA TGACCTCACA
CGCGAAATCA ACAGGCTAAC TCCCCCGTCG CACACTACTG TTAGTCACGT GGCCACACCG
TTTGAACAAC TAACTTCATT TGCACGACAA ACAGCAGTGC GCATGGCGCT TCTTGGTGCC
GCAACAACTT TTGGAACGGC AATTGGCATC ACAGCGCTGG ACCATTTTCA CAAACGAAAA
GAACAACGCC AGGCACAATT CCCCCATCAA CGGCCTGTGA CTGTCGATAT TCACGGCACA
GAGGCGACCG TCTACACCTA CGGCGCCGAC GTGTATGCAG ATATGCTTGC GGCGATCCGT
TCAGCTGAAG TGTCAATCTA TCTCGAAAGC TACATTTGGA AAAATGATGA GGTTGGCCTC
GAATTCAAAG ACGCAGTGAT CGATGCGGCT CAGCGTGGAG TTGAGGTGTA CCTTATTTAT
GACACCTTCG CCAACCTCGT TGTCCCCCGA GAGTTCTTCC GCTTCCCGAG TAATGTACAC
GTGCTTGCGT ACCCACTTTT TCGACCACAG ATCCTTTTGC TCAATTTAAA GTACACCGGG
CGAGATCACA GAAAAATTCT TGTTGTTGAT GAAGCAGTAG GGTTTGTCGG TGGGTTCAAC
ATCGGGTCGG TCTACGCTAC CCAATGGCGA GACACTCACC TCAAACTGAC AGGGCCGGGC
GTATGGGAAC TCACCAACGC TTTCGTGAGC TTCTGGAACC ATAATCGGAC CGAAGCTCTC
CCCCTGATCG AACCATCAGC AACACCTGAC TGGCTCCCCC GAATCCAAAC AGCTGAAAAT
GCACCAATTC GACAGGTGTA TCCGGTTCGG AATATCTACT TATCTGCGAT TCGTCGTGCA
ACACATCATA TTTATCTCAC CCAGGCATAC TTCATTCCTG ATGATGTGTT CCTGCAGGAC
CTTCTCGATG CGGCCGCACG GGGTGTTGAT GTACGAGTTA TCGTCCCAGA GGCGTCCAAC
CACGTGATCA CTGATTGGCT TTCTCGAGGT CTTTATTCCA AACTCTTGCG CGGTGGAGTG
ACTATTTGGC TCTACCAAAA TGCAATGGTG CATGCAAAGA CGTGCACAGT TGATGGCGAA
TGGACAACAA TCGGTACTGC AAACATTGAC CGGCTCAGCT TGCAAGGTAA CTACGAAATT
AACATGTCCA TTTACAGCGT GGAACTCGCT CAAGAAATGG AAAAGGTCTT CGCTTTAGAC
TTATCGAACT GCAGGCGGCT TGATCTTGAC GAGTGGGAGA ACCGGCCTGT GATGAATCGG
ATCGGTGAAC GTGTGCTCAC CCCGCTCACT CCCCTGTTGT AA
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| Protein sequence | MHDMWPEEDC VRSQRDDDLT REINRLTPPS HTTVSHVATP FEQLTSFARQ TAVRMALLGA
ATTFGTAIGI TALDHFHKRK EQRQAQFPHQ RPVTVDIHGT EATVYTYGAD VYADMLAAIR
SAEVSIYLES YIWKNDEVGL EFKDAVIDAA QRGVEVYLIY DTFANLVVPR EFFRFPSNVH
VLAYPLFRPQ ILLLNLKYTG RDHRKILVVD EAVGFVGGFN IGSVYATQWR DTHLKLTGPG
VWELTNAFVS FWNHNRTEAL PLIEPSATPD WLPRIQTAEN APIRQVYPVR NIYLSAIRRA
THHIYLTQAY FIPDDVFLQD LLDAAARGVD VRVIVPEASN HVITDWLSRG LYSKLLRGGV
TIWLYQNAMV HAKTCTVDGE WTTIGTANID RLSLQGNYEI NMSIYSVELA QEMEKVFALD
LSNCRRLDLD EWENRPVMNR IGERVLTPLT PLL
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