Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1293 |
Symbol | |
ID | 8380470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1382767 |
End bp | 1384392 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645004042 |
Product | Amidohydrolase 3 |
Protein accession | YP_003161252 |
Protein GI | 256832525 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.958478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.919928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAAC TGTTAATAAC AAACGCCACC ATTCATTCTT CTCGTCATCC TTTTGCAACC GCGCTGCTCG TGGACAACGG TGTTGTCGCG TGGGTGGGGG ACACCGAGGT TGCACGGTCA ATTGCCCCTA ACGCCACCGT GCGCGACGCT GAAGGAGCTC TTGTCACGCC AGCGTTTGTG GACGCTCACG TGCATGTGTT GGAAACAGCA ATCACGATGC GGTCACCGCA ACTATCCCCC CGGGCTGGGG TAACAACGCG GGAACAGGTG AAGAACCGTA TTGCTGAGGC GGCGGCTGGA TGGAAGCCAG GGGAGCACCC CATCACGTTC CTGGGATACG ACGATTCCGG GTGGCCAGAA CAGGATCGGT TGTCATGGCA GGACATTGAT CAGGTGGCTG GTACGGTCCC CGTCTATGTG CCACGAGCTG ATCTCCACTC GGCCTTAGGG TCTACTGCGT TGCTGCGGTG GGCGGAACTC AACGATGTCA ACACTCCACG AACTACGCCG CTTCGTGACG ATGACCATGT GCATGTACGT CAGGCACTGC AGGTGTTGGA CCCGTTCTTC CGCGACGAAC TGTACCGGTC AGTGTTGGCG CGCTGCGCAT CGTTAGGTGT TGTGGAGGTT CACGAAAACT CGGCGCCTGG GATTGACACC CGCGCTGGGT TGGCGCGGCT TATTGAGATG ACACGTGAGC CGGAATCTGG TCTTCCGCTT GTTGTGGGGT ATCGTGGCGA GGCTGTGAGT TCAGTTGACC AGGTAGAGGC GCTGGCAACT GAAATCCCTG GCCTGCAAGG TCTTGCTGGG GATTTATCGG TCGATGGTTC GTTCGGGTCA CGTTCTGCAC TGCTCCGGCA GGATTACAGT GACGATGCGG GCAATCGCGG GACACAGCAT CTGTCCGTGA CAACTGTGGC TGACCACATT CGTGCGACCT CCCTTGCCGG AGTTCAAGGT GGGTTTCATG TGATCGGTGA CGGCGCACTC GATGTGGTAG TTCAGGCTCT TCAGCAGGTT GCTGGTGAGT CCCCCCAGAT GCGTCAAGCA ATCCGGCGGG CGGGGCACCG ACTTGAACAC GTTGAACTCC TTGATGACAA CGCTCTTGCA ACGTGTGTGG ACCTCAGCGT GATGATCAGC GCCCAGCCAG CGTTCGACGC ATGGTGGGGT GGGCCATCAG GAATGTACGC CCAGCGACTA GGCCAGCAGC GGGCGCTGGC AACGACGCCG ATCCGGTCAA TGATGGCCTC TGGTGTCACG GTTGGGTTCG GGTCTGATTC GCCGGTGACG CCAATAAACC CATGGGATGG TGTGCGTGCT GCGGTGTGGC ACACCAACAG TGATCAGCGT ATTTCTGCAC GGGCTGCGTT TCGCGCACAC ACACGCGCCG GGCATCGGTT ACGTGGAGAA GTCACAGCTG GGGAGATCAC TGTGGGGGCT CCTGCTCATC TTGCGTTGTG GGATGCGCCG GAGTTAGGTG TCCAGGCTGA AAATGATGGG CGTTCGTCGT GGTCAACTGA TGCGCGCAGT GGTACACCGT TGCTTCCTTA CCTTGCTCAA GAGGGTCTTG TTCCCACCTG TTTAGCTACC TGGCGCAGTG GAGAGTTGAT CTACGAAGCA CCGTAA
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Protein sequence | MPQLLITNAT IHSSRHPFAT ALLVDNGVVA WVGDTEVARS IAPNATVRDA EGALVTPAFV DAHVHVLETA ITMRSPQLSP RAGVTTREQV KNRIAEAAAG WKPGEHPITF LGYDDSGWPE QDRLSWQDID QVAGTVPVYV PRADLHSALG STALLRWAEL NDVNTPRTTP LRDDDHVHVR QALQVLDPFF RDELYRSVLA RCASLGVVEV HENSAPGIDT RAGLARLIEM TREPESGLPL VVGYRGEAVS SVDQVEALAT EIPGLQGLAG DLSVDGSFGS RSALLRQDYS DDAGNRGTQH LSVTTVADHI RATSLAGVQG GFHVIGDGAL DVVVQALQQV AGESPQMRQA IRRAGHRLEH VELLDDNALA TCVDLSVMIS AQPAFDAWWG GPSGMYAQRL GQQRALATTP IRSMMASGVT VGFGSDSPVT PINPWDGVRA AVWHTNSDQR ISARAAFRAH TRAGHRLRGE VTAGEITVGA PAHLALWDAP ELGVQAENDG RSSWSTDARS GTPLLPYLAQ EGLVPTCLAT WRSGELIYEA P
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