Gene Jden_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1293 
Symbol 
ID8380470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1382767 
End bp1384392 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content59% 
IMG OID645004042 
ProductAmidohydrolase 3 
Protein accessionYP_003161252 
Protein GI256832525 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.958478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.919928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAAC TGTTAATAAC AAACGCCACC ATTCATTCTT CTCGTCATCC TTTTGCAACC 
GCGCTGCTCG TGGACAACGG TGTTGTCGCG TGGGTGGGGG ACACCGAGGT TGCACGGTCA
ATTGCCCCTA ACGCCACCGT GCGCGACGCT GAAGGAGCTC TTGTCACGCC AGCGTTTGTG
GACGCTCACG TGCATGTGTT GGAAACAGCA ATCACGATGC GGTCACCGCA ACTATCCCCC
CGGGCTGGGG TAACAACGCG GGAACAGGTG AAGAACCGTA TTGCTGAGGC GGCGGCTGGA
TGGAAGCCAG GGGAGCACCC CATCACGTTC CTGGGATACG ACGATTCCGG GTGGCCAGAA
CAGGATCGGT TGTCATGGCA GGACATTGAT CAGGTGGCTG GTACGGTCCC CGTCTATGTG
CCACGAGCTG ATCTCCACTC GGCCTTAGGG TCTACTGCGT TGCTGCGGTG GGCGGAACTC
AACGATGTCA ACACTCCACG AACTACGCCG CTTCGTGACG ATGACCATGT GCATGTACGT
CAGGCACTGC AGGTGTTGGA CCCGTTCTTC CGCGACGAAC TGTACCGGTC AGTGTTGGCG
CGCTGCGCAT CGTTAGGTGT TGTGGAGGTT CACGAAAACT CGGCGCCTGG GATTGACACC
CGCGCTGGGT TGGCGCGGCT TATTGAGATG ACACGTGAGC CGGAATCTGG TCTTCCGCTT
GTTGTGGGGT ATCGTGGCGA GGCTGTGAGT TCAGTTGACC AGGTAGAGGC GCTGGCAACT
GAAATCCCTG GCCTGCAAGG TCTTGCTGGG GATTTATCGG TCGATGGTTC GTTCGGGTCA
CGTTCTGCAC TGCTCCGGCA GGATTACAGT GACGATGCGG GCAATCGCGG GACACAGCAT
CTGTCCGTGA CAACTGTGGC TGACCACATT CGTGCGACCT CCCTTGCCGG AGTTCAAGGT
GGGTTTCATG TGATCGGTGA CGGCGCACTC GATGTGGTAG TTCAGGCTCT TCAGCAGGTT
GCTGGTGAGT CCCCCCAGAT GCGTCAAGCA ATCCGGCGGG CGGGGCACCG ACTTGAACAC
GTTGAACTCC TTGATGACAA CGCTCTTGCA ACGTGTGTGG ACCTCAGCGT GATGATCAGC
GCCCAGCCAG CGTTCGACGC ATGGTGGGGT GGGCCATCAG GAATGTACGC CCAGCGACTA
GGCCAGCAGC GGGCGCTGGC AACGACGCCG ATCCGGTCAA TGATGGCCTC TGGTGTCACG
GTTGGGTTCG GGTCTGATTC GCCGGTGACG CCAATAAACC CATGGGATGG TGTGCGTGCT
GCGGTGTGGC ACACCAACAG TGATCAGCGT ATTTCTGCAC GGGCTGCGTT TCGCGCACAC
ACACGCGCCG GGCATCGGTT ACGTGGAGAA GTCACAGCTG GGGAGATCAC TGTGGGGGCT
CCTGCTCATC TTGCGTTGTG GGATGCGCCG GAGTTAGGTG TCCAGGCTGA AAATGATGGG
CGTTCGTCGT GGTCAACTGA TGCGCGCAGT GGTACACCGT TGCTTCCTTA CCTTGCTCAA
GAGGGTCTTG TTCCCACCTG TTTAGCTACC TGGCGCAGTG GAGAGTTGAT CTACGAAGCA
CCGTAA
 
Protein sequence
MPQLLITNAT IHSSRHPFAT ALLVDNGVVA WVGDTEVARS IAPNATVRDA EGALVTPAFV 
DAHVHVLETA ITMRSPQLSP RAGVTTREQV KNRIAEAAAG WKPGEHPITF LGYDDSGWPE
QDRLSWQDID QVAGTVPVYV PRADLHSALG STALLRWAEL NDVNTPRTTP LRDDDHVHVR
QALQVLDPFF RDELYRSVLA RCASLGVVEV HENSAPGIDT RAGLARLIEM TREPESGLPL
VVGYRGEAVS SVDQVEALAT EIPGLQGLAG DLSVDGSFGS RSALLRQDYS DDAGNRGTQH
LSVTTVADHI RATSLAGVQG GFHVIGDGAL DVVVQALQQV AGESPQMRQA IRRAGHRLEH
VELLDDNALA TCVDLSVMIS AQPAFDAWWG GPSGMYAQRL GQQRALATTP IRSMMASGVT
VGFGSDSPVT PINPWDGVRA AVWHTNSDQR ISARAAFRAH TRAGHRLRGE VTAGEITVGA
PAHLALWDAP ELGVQAENDG RSSWSTDARS GTPLLPYLAQ EGLVPTCLAT WRSGELIYEA
P