| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1286 |
|---|
| Symbol | |
|---|
| ID | 8380463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1375040 |
|---|
| End bp | 1376164 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645004035 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003161245 |
|---|
| Protein GI | 256832518 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.238447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCTCG GCCGACAATG GAACGGATGC CAAGAAGCCC AGGTTGTGGA CTCCCACGGA
CACACCATCC GGGCACTGGC CTACACCCAA CTCGTTGGGA CACTGACCAC CGGGATGGAC
GTCCACCTCA ACAGCACCGC GCTCGACCGC GGACTGGGAA CTGGCGGGTA CGCGATGATT
GTCGCCACCC ACACCGCCCA ACCCCACCAA GGGCGACGCC CCGACTCCCA CGGTCACCTC
GTCAAAGCAC GCTACACCCC CACTCAAGCG ATGGTTCTTG GAGTCGACGA ACAAGAATCC
GAGCACCACG ACACTATGCG AGAAGCCACC AGCCTCGACG GGATGCCAGT GATCACCACC
GACCTCCATT CAGCTCTTCC CGCGATCGTC ACAGGCATCG AACAAGGGTG GACCAAGACC
ACACCACCCA CGATCGCCTA CGTCATGACA GACGGCGGAG CGTTACCAGC CTGGTTTTCC
CGCACCGTCG ACACCCTGCG CAGCACTCAA CGCATCACCA GTGTCATCAC CACCGGACAA
GCATTTGGCG GCGACTTTGA GGCTGCCACC CTCCACACCG GGTTGCTCGC TGCACGCCAC
GTTGTCCGAG CCGACATTGC AATCGTCATT CAAGGTCCTG GCAACCTCGG AACGGGAACC
CCATGGGGGT TTTCAGGTAT CCACGTTGGT GAGGTCATCA ACGCCACCCA CATCCTGGGC
GGCCACCCCA TTGCCGCGTT ACGGCTCTCA GGTGCAGATG CTCGCCCTCG CCACCAAGGC
ATCTCCCACC ATTCACTGAC CGCCATCGGC AAAGTTGCCC TCGCCCCCGC GACCGTCATC
TGCCCACAGT TACCAGCAGA CACGTGGTTC ACCGACCTCT TCACAGCCAA CGACACCTTA
GCTGCTGATG CACTATCCAC ACTCATCACC CGACAAATAG CTGACCTTCG CGATCAAGCC
CCACACCACA CCTACATTGA CCAAGACCTC ACGCCCGCAC TGCACACGGC ACTTCATCAC
TCCCCGGTCA CCCTGTCCAC CATGGGACGG GGCTACACTA GTGACCCGTT AGCATTCCTT
GCTGTCGCAG CTGCAGGCCT GTGGGCTGCC ACCCACATAA ACTAA
|
|---|
| Protein sequence | MSLGRQWNGC QEAQVVDSHG HTIRALAYTQ LVGTLTTGMD VHLNSTALDR GLGTGGYAMI
VATHTAQPHQ GRRPDSHGHL VKARYTPTQA MVLGVDEQES EHHDTMREAT SLDGMPVITT
DLHSALPAIV TGIEQGWTKT TPPTIAYVMT DGGALPAWFS RTVDTLRSTQ RITSVITTGQ
AFGGDFEAAT LHTGLLAARH VVRADIAIVI QGPGNLGTGT PWGFSGIHVG EVINATHILG
GHPIAALRLS GADARPRHQG ISHHSLTAIG KVALAPATVI CPQLPADTWF TDLFTANDTL
AADALSTLIT RQIADLRDQA PHHTYIDQDL TPALHTALHH SPVTLSTMGR GYTSDPLAFL
AVAAAGLWAA THIN
|
|---|
| |