| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1270 |
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| Symbol | |
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| ID | 8380447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1361076 |
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| End bp | 1361873 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004018 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003161229 |
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| Protein GI | 256832502 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACACA CCCGAGGTGG GCGTCGACGC CCCCAGCAAC AACAGCCAGC ACCCACGCAC
GACGTCCACG TCGCTGATGG TATCCGACTC CAAAAAGTCA TGGCAGACGC TGGGGTTGGA
TCCCGTCGTG AATGCGAGAA CCTTATTCGA CAAGGACGTG TTGAGGTCGA TGGTCAGATC
GTCATGGAAC TTGGTGTGCG GGTGGACCCG ACTGCACACG TTGTCACTGT TGACGGTTTA
CGGATCATGG CAGACGCATC GAAAATCACG ATTGCGGTGA ACAAACCACA AAAAATGGTC
GCAACCATGC ACGACCCAGA GGGTCGAGCC ACTGTCGCAG ATTTGGTCTC TAAGCGTACC
GAACGTCTCT TCCACGTCGG GCGACTCGAC TATGAATCTG AAGGACTTCT CCTCCTCACA
AACGACGGAG AGCTTGCTAA TCGTTTGTCC CACCCCCGCT ACAACGTGCG AAAAACCTAC
GTGGTTACGG TGAAGGGGCG CGTTGCCAAC GGAGTCGGAT CCCAACTTCT GCGAGGCATC
ACCTTAGAAG ATGGCGAGGT CGCACTCGAC TCATACCGTG TGATCGACCA AACAGACACC
GAGACCATGA TCGAAGTGCA ACTACACTCA GGCCGCAACC GAATTGTCCG CAGGATTTTT
GACTCCCTTG GTCACCCTGT CACGCGTCTC GTGCGGACCT CAATCGGCCC CATCAAACTT
GGAGATCTCA AGCAAGGACG AACCCGTGTA CTCAACCGCA CCGAGGTCGC TACTCTCATG
ACCCTGGTCG GCTTGTAA
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| Protein sequence | MGHTRGGRRR PQQQQPAPTH DVHVADGIRL QKVMADAGVG SRRECENLIR QGRVEVDGQI
VMELGVRVDP TAHVVTVDGL RIMADASKIT IAVNKPQKMV ATMHDPEGRA TVADLVSKRT
ERLFHVGRLD YESEGLLLLT NDGELANRLS HPRYNVRKTY VVTVKGRVAN GVGSQLLRGI
TLEDGEVALD SYRVIDQTDT ETMIEVQLHS GRNRIVRRIF DSLGHPVTRL VRTSIGPIKL
GDLKQGRTRV LNRTEVATLM TLVGL
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