| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1266 |
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| Symbol | |
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| ID | 8380443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1357615 |
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| End bp | 1358547 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004014 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003161225 |
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| Protein GI | 256832498 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA CCTCTGATAG GGATATCGTT CAAGGCTATC TGCAACATCT TCTTGTAGAG
CGCGGCGTAT CGCCGAATAC GCTCGCTGCG TACCGTAGGG ATCTTGCCCG TTACCTTGAC
TATCTTTCTC ACAGAGAGCT CTCGCTTCAC AGCGTTACGC AGAGCACCAT TGATGATTTC
CTGGTGGCGT TACGTGAGGG GAGCCTCGGC CAGTCTTTGA GTCAAAGCTC TGTCTCCCGT
CATCTTGCTT CATTGCGCGG TCTGCATCGA TATGCGGAGG CAGAGGGTGT CGTGGCGGGA
GACCCAGCCG TGTCTGTACG TCCGCCAAAG CTCCCGCAAC GCCTTCCTGA TGTGCTCTCA
ACGCATGACG TCGAACGCTT GCTCACTACC CCTCCTCTCG ACAGTGCGGT GGGGCTTCGT
GACCGGGCAT TGCTGGAGTT TCTTTACGCA ACCGGTGCGC GGATCTCTGA GGTGGTTGGT
CTCGATCGTG ATGATGTGAT CGCAGATGAT GGTTTTGTTG TTGCGCGTGT GCTTGGGAAA
GGTCACAAAG AACGACTTGT GCCCGTGGGG TCTTGCGCTT ATGACGCATT GAATGCCTAC
TTGGTGCGTG CTCGCCCCGA GCTTGCAGGA GCGGGGGTCG GAACTCCAGC GTTGTTTCTT
AACACCCGTG GACGCAGATT ATCGCGTCAA AGCGCTTTCG GTGTCGTTCG GTCTGCTGCT
CGTCTCGCTG CGATTCCTGG CGCGGAATCA GTCTCTCCCC ACACACTTCG ACATTGTTTT
GCAACGCACA TGCTCAGTGG CGGCGCTGAT ATTCGAGTTG TCCAGGAACT TCTAGGGCAT
GCTTCTGTGA CCACTACACA GATTTATACC CATGTTTCTG CCGATGCGCT GCGTGAGGTG
TATGCCAGTA GTCACCCGCG CGCATTGAGC TAG
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| Protein sequence | MSDTSDRDIV QGYLQHLLVE RGVSPNTLAA YRRDLARYLD YLSHRELSLH SVTQSTIDDF
LVALREGSLG QSLSQSSVSR HLASLRGLHR YAEAEGVVAG DPAVSVRPPK LPQRLPDVLS
THDVERLLTT PPLDSAVGLR DRALLEFLYA TGARISEVVG LDRDDVIADD GFVVARVLGK
GHKERLVPVG SCAYDALNAY LVRARPELAG AGVGTPALFL NTRGRRLSRQ SAFGVVRSAA
RLAAIPGAES VSPHTLRHCF ATHMLSGGAD IRVVQELLGH ASVTTTQIYT HVSADALREV
YASSHPRALS
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