Gene Jden_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1248 
Symbol 
ID8380425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1336084 
End bp1337016 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID645003996 
ProductPfkB domain protein 
Protein accessionYP_003161207 
Protein GI256832480 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000612898 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAAC CAATCAGCCT CTTTGTTGGG CTCACCACGC TCGATATTGC AACACGCATC 
ACCACGTTTC CCACACCCAA CGAAAAACTC ACGGCCCACC ATCAAGATAT TGCAGCAGGA
GGCCCAGCAG CCAACGCAGC TGTCACCTGC GCTGCACTTG GTGGTCACGC TATTCTCCTG
ACCGTGATCG GGACGAGTCC TCAAGCACGC ATCGCAGCGG CCGACCTTGC CGCCCACAAC
GTCACCGTCA TCGACCTTGC CGGACCTGAC CACGGTCTGT CTGTATCCAG CATCCTCATC
ACCGAACACA CCGGGGAACG AGCCGTTATT TCTACCGATG CTCAACCCCA CACGCTGACA
CCTCAGATGA CCAGCCGCCT CACCACGCAG CTAAGCACAC TACTGCCACG TGTCCATGCG
ATCCTCATCG ACGGACACCA CCCCCATCTT GCGCGCCACA TCCTCGCCCA ACGGCCCACC
AATGCTGCCC CCATCATCGT TGATGCCGGA CGGTGGAAAC CTGCGTTTGA CGATCTCATC
CCGCACGCCC AACACATTAT TGCTTCAGCA GATTTCCACG ACCCACACGG CTGGGTGCCA
CTCACCCCCG AGAACCGCAC CACACTCACT ACCGCACCAA CAATCGTGCG TACACACGGT
GAACACCCCA TCACCGTGTG GCATCCCACC ACCACAACCA CGATCAGCCC ACCAGGCGTT
GTCACCCGTG ACACCCTCGG TGCCGGAGAT GTTTTCCACG GGGCATATAC CCACTTCGTT
GCCACCCACC ACCACACCCA CAACCACCCG CCCACCGACC TAGCCGACAT CACAGCCGTC
ACAACCAACG CATCGGTCAT TGCGGCACAT CGGGTCGCCA CAGTTGGCCT GCGAAGTTGG
ATCACACAAC TCGCCGACCC CACTCAACTG TGA
 
Protein sequence
MTQPISLFVG LTTLDIATRI TTFPTPNEKL TAHHQDIAAG GPAANAAVTC AALGGHAILL 
TVIGTSPQAR IAAADLAAHN VTVIDLAGPD HGLSVSSILI TEHTGERAVI STDAQPHTLT
PQMTSRLTTQ LSTLLPRVHA ILIDGHHPHL ARHILAQRPT NAAPIIVDAG RWKPAFDDLI
PHAQHIIASA DFHDPHGWVP LTPENRTTLT TAPTIVRTHG EHPITVWHPT TTTTISPPGV
VTRDTLGAGD VFHGAYTHFV ATHHHTHNHP PTDLADITAV TTNASVIAAH RVATVGLRSW
ITQLADPTQL