Gene Jden_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1246 
Symbol 
ID8380423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1332778 
End bp1333893 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content62% 
IMG OID645003994 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003161205 
Protein GI256832478 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000103579 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.557515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCGG ACTTCACCAC CGCTGAAACC ATCCACTACG CACGCCAAAT GGCGCTACCT 
GGTTTTGGAC ACACTGCGCA ACAAGCCCTC CGCGACGCCC ACGTCCTCGT CATCGGAGCC
GGTGGCCTCG GCTCCCCCGC CCTCATGCAC CTCGCCGCCG CCGGAGTAGG CACCCTCGAA
ATATACGACG ACGACACAGT CGACCCCTCC AACCTCCACC GCCAACTCAT CCACTCCTAC
CCCCGCATCG GACAACGCAA AACCGACTCA GCAGCCACAA CCCTCACGCA ACTCAACCCC
CACATCACCA TCATCACCCA CCCCACCCGA CTCACCCACA ACAACGCCTA CGACGCCATC
AACCGAGCAG ACCTCGTCAT CGACGGCACC GACAACTTTG CTACCCGCTA CCTCATCAAC
GACATCTGCG TCACCACAGC AACCCCCTAC ATTTGGGCAG CAATCTCCGC CTGGGACGCC
CACATCAGCG TCTTCGCGCT CCCCCACACA CCGTGCTACC GATGCCTACA CCCCACACCG
CCACCACCCA ACACCGTACC CACCTGCGCA CAAACCGGAG TCCTCCCCAC CCTTCCCGGA
CTCATCGGAA CAACCCAAGC ACACGAAGCA ATCACCCTCA TTACCGGAAT CGGCACACCA
CTCACTGGAA CGCTCGCCAC CTACTCCGGG CACACGAACA CTTGGAACTA CCTCCCCCTC
AACCCATCAC CCACCTGCCC CACCTGCTCA ACCAAACCCA CCACCACCCC ACACCACCAA
CCAGACCCAC CACCACCAAC CAGACCCACC AACCACCCAT CAGCACTCAC CAACCACCCA
TCAGCACTCA CCAACCACCC ATCAGCACTC ACCACCGCCA CCACCATCGA CATTCGCCCA
CCCCACACCA CCCACACAAA CCCGTGGCCA ACCACCCTCA CCATCCCCCT ACCTGACATC
CTCGCTAACC CACACGCCAC CGCCACCCGC CTCGCCACAC ACCCCGCACC TCGCATCATC
TACTGCGAAT CAGGAACAAC CGCCCAGCTT GCAGCCCTCA CCCTCACCGA CGCAGGCCTC
ACCGACGTCT CCGCCCACCC AGGTCCACCA CAATGA
 
Protein sequence
MTPDFTTAET IHYARQMALP GFGHTAQQAL RDAHVLVIGA GGLGSPALMH LAAAGVGTLE 
IYDDDTVDPS NLHRQLIHSY PRIGQRKTDS AATTLTQLNP HITIITHPTR LTHNNAYDAI
NRADLVIDGT DNFATRYLIN DICVTTATPY IWAAISAWDA HISVFALPHT PCYRCLHPTP
PPPNTVPTCA QTGVLPTLPG LIGTTQAHEA ITLITGIGTP LTGTLATYSG HTNTWNYLPL
NPSPTCPTCS TKPTTTPHHQ PDPPPPTRPT NHPSALTNHP SALTNHPSAL TTATTIDIRP
PHTTHTNPWP TTLTIPLPDI LANPHATATR LATHPAPRII YCESGTTAQL AALTLTDAGL
TDVSAHPGPP Q