Gene Jden_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1238 
Symbol 
ID8380415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1327067 
End bp1327783 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID645003986 
Productrespiratory nitrate reductase, gamma subunit 
Protein accessionYP_003161197 
Protein GI256832470 
COG category[C] Energy production and conversion 
COG ID[COG2181] Nitrate reductase gamma subunit 
TIGRFAM ID[TIGR00351] respiratory nitrate reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.361113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCGA ACTTCTGGTT TGTGATTTTC CCCTATATTT GTGTGGCGAT CTTCGTGGTC 
GGTCACATCT GGCGGTACCG GCACGACCAA TTCGGGTGGA CAACCCGCAC GAGCCAAGTC
TTAGAAAGCC GATGGCTCAG TTGGGGCTCC CCACTTTTCC ACTTCGGGGC ACTCTTTGTC
ATTGCCGGAC ATGTTGGTGG GCTACTCATC CCACAAGAAT GGACCCGCGC ACTTGGGGTC
AACGACCACA TGTACCACAA CCTGTCCATG TACATCGGGA CAGCGGCAGG CGTAGCGCTC
GTCGCCGGCA CGATCATCCT CATCATCCGC CGGTTTGTCA CCTCACAACG CATCCGCGTT
GTCACCACTG CCTGGGACTA CGCTCTCTAC GCCTTGCTCG TCATCGAAAT CTTCGTCGGC
ATGTGGCAAA AGATTTCCAC CAACATTGTG GGTGAAGGCT ACGACTACCG CGGAACAGTG
TCTGTGTGGT TCCGACAACT CTTTATTTTG CAACCAGATG CAGCACTCAT CATGGACGCC
CCCACAATTT ATGCGATCCA CGCGATCCTT GGCTGCCTGC TCATTGCAAT CTGGCCATTC
ACTCGGCTTG TCCACGTGTG GTCAATCCCC GTGGCCTATC TGGCTCGCCC CTACGTGGTC
TACCGCAGAA AACACACACC AGATGTGTCT CCCTTAACCA AAAGCATGCG CAAATAA
 
Protein sequence
MWANFWFVIF PYICVAIFVV GHIWRYRHDQ FGWTTRTSQV LESRWLSWGS PLFHFGALFV 
IAGHVGGLLI PQEWTRALGV NDHMYHNLSM YIGTAAGVAL VAGTIILIIR RFVTSQRIRV
VTTAWDYALY ALLVIEIFVG MWQKISTNIV GEGYDYRGTV SVWFRQLFIL QPDAALIMDA
PTIYAIHAIL GCLLIAIWPF TRLVHVWSIP VAYLARPYVV YRRKHTPDVS PLTKSMRK