| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1235 |
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| Symbol | |
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| ID | 8380412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1321072 |
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| End bp | 1324797 |
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| Gene Length | 3726 bp |
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| Protein Length | 1241 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003983 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_003161194 |
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| Protein GI | 256832467 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.177999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC CAACCAACGA GTCGATGTCG CCACTTGTGA AGAAACTCCT CGCCTCCCGC
GGGTTGCTCC CTCACACCGA AGTGTTCGAC AACTCCCACG CCTACGTGGA AACAAACCCA
TCGGAGTGGG ATGAGTTCTA CCGTAACCGA TGGTCGCACG ACAAGATCGT CCGATCGACA
CACGGGGTCA ACTGCACAGG GTCGTGCGCG TGGGATGTTT ACGTCAAGGA CGGACTGATC
ACCTGGGAGC ACCAGGGAAC GAACTACCCA ACAACAGGTC CAGACAGCCC TGAGTACGAA
CCTCGTGGTT GCCCGCGTGG TGCGTCATTT TCGTGGTACA CCTACTCACC GGGGCGCGTG
AAATACCCAT ATATCCGCGG CGTCCTGCTT GAGCTGTATC TCAAAGCAAA AAAGGAACAC
CCAGACCCGG TGGATGCATG GGAATCAATC GTCACCTCCC CTTTGAAATC CGCGATGTAC
AAAACAGCTC GCGGAAAAGG AGGGCTTGTT CGCGCAAACT GGGAGTTGGC GACCGAAATC
ATGGCCGCCG CCCATGTGTA CACCATCAAG AACTTTGGAC CGGATCGGTG CGTAGGGTTC
ACCCCAATCC CCGCAATGTC CATGGCCTCA TTTGGGGTAG GAACCCGATT CCTATCCATG
ATTGGCGGGA CCCTACTCAG CTTTTACGAC TGGTACGCCG ACCTGCCACC AGCATCCCCA
CAAATCTGGG GCGACCAAAC AGATGTCCCA GAGTCGGGGG ACTGGTGGAA CGCCGGATAC
ATCATGATGT GGGGATCAAA CATTCCCGTC ACAAGAACAC CCGACGCCCA CTTCCTCGCC
GAAGTACGGT ACAAAGGAAC CAAAGTCGTT GCGGTATCCC CTGACTATGC TGAAAACGTC
AAATTCGCTG ACGACTGGCT TGCTCCCGCT CCAGGAACAG ATGGGGCCCT CGCCCTAGCA
ATGGGTCATG TCATCCTCAC CGAGTTCTAC CGGGACCGCA CCGTTGAATA CTTCACCCGC
TATGCCAAGA AGTTCACCGA TTCCCCGTTC CTAGTGTCCC TCGACAAAGG GGACAATGAC
GGAACCTACC GGGTTGGCAA GTTCTTGACC GCCGCAGACC TCAACCCCAC CTCAGTGCAC
GGAGCTACCG GCGACCGTGC CGAGTTCCGC CCCGTTTTCC TCGACTCAGT CACCAACAGC
GTGACTGTTC CCAACGGAAC CCTGGCCGAC CGGTGGACTG ACGAAGGCAA AGGGCGATGG
AACCTCGACC TTGACGGTCA AGACCCACAC CTGACGCTGC TTGACACGAC CTACCAAGGC
CAAACCGCAT CGTCAGCCAC TGTGCTCATG CCACGTTTTG ACGAAGGAGC GACCGAAGGT
GGCAGCACCA TTACCCGTGG TGTGCCCACC CTCACCATTG ACGGACACGT GGTGACCACC
GTTTTTGATC TGCTCCTGGC CAACTACGGT GTTGGACGTG ATGGGCTGCC CGGCCAATGG
CCAACCGGCT ATGACGATGC CTCGGTTCTT GGCACACCCG CGTGGCAAGA AAACCTATCC
GGAGTCACTG GTGAACAATG TGCACGCATC GCACGGGAAT TTGCCCGTAA CGCGGAGATG
ACACAAGGGC GATCCATGAT CGTCATGGGC GCGGGCACCA ACCACTGGTA CCACTCGGAC
ACGATCTACC GCACCTTCAT CTCCCTGCTC ACCATGACCG GTTGCCAAGG TGTGAACGGT
GGGGGATGGG CGCACTACGT TGGACAAGAA AAAGCTCGAC CTGTGACTGG ACAACAGCAC
ATGTCCTTTG CTCTTGATTG GCAGCGCCCA ACCCGCCACA TGGCAGGCAC CGCGTTTTGG
TACACAGCAA CTGACCAGTG GCGGTACGAA GGATTCGACG CTGATGAGTT CACCTCACCA
GCTGCAGCCA AAGGGTTCAC CCGCTCCGCT ATTGCAGACT GTCTTGCTCA AGCTCAACGC
CTCGGCTGGA CACCAGCGCA CCCCGGGTTT GACCGCAACC CTCTTGACAT TTGCGATCAA
GCCCAAGAAG CGGGGAAAAC CGTCCCCACA TACGTTGTTG ATGAACTCAA AGGTGGCCGC
CTCAAGTTCG CCATGGAAGA CCCCGACAAC CCCGTCAACT TCCCACGGGT TCTCACCTTG
TGGAGATCGA ACCTCATTGG TAACTCCGCC AAAGGCAACG AGTACTTCCT CAAGCACCTG
CTGGGCACAA CCGACGCGAT CCGGGGGAAG GAAACACCCC CAGAAAACCG TCCCAAAGAT
ATTGTGTGGC GGGAAAAGGC CGCGGAGGGC AAGCTTGACC TGCTGACCAA CATTGACTTC
CGTATGACGG GAACGTCATT GTTCTCTGAC ATCGTGCTTC CAGCTGCCAC ATGGTACGAA
AAACAAGACC TGTCCACCAC GGACATGCAC CCGTTTGTTC ACGCCCTCAA CGCAGCGATC
ACACCAGCAT GGGAGTCACG TACCGACTAC GATGCTTTCC TTGGACTGGC AGACAAAGTC
TCTGAGTTGG CGCACACCCA CCTGGGAACT CGCACCGATG TCATCGCGGC TCCGCTGACC
CACGACACCC CCGACGAAAT GGCGCAACCA CACGGCATTG TCCGTGACTG GAAAGACGGA
GAATGTGACC CTATTCCCGG TGTCACCATG CCTCGGCTTG TCACCATTGA GCGTGACTAC
ACAAAAATCG GTGAGAAGAT GCGCGCCGTA GGGCCACTGA TCTCCAGCGC AGGGACCACC
ATTAAGGGGG TAACGATCGT TCCTGACAGC GCCATCAGCC ACCTTGAAAA GGCGAACGGT
GTGCAACGGT CAGGAATCGG TCAAGGACGC CCACGCCTGG ACACCGCAGC TCATTTCTGT
GAAGCGATTC TTGCGCTGTC TGGAACCACA AATGGTGCAG TGTCTGTGGC CGGGTTTAAA
GCACTCGAGC AACGCACCGG CGTCACGATG CACGACCTTG CTGAAGAAAA CGAGGAACGG
ATCATCACCT TCCCTCAAGC ACTATCAGGA CCACAACCAG TGTTTACTTC GTATGAATGG
TCTGGGTCGG AAAAGGGAGG TCGTCGCTAC TCTCCGTTCA CAATCAACGT GGAACGCGAT
AAACCATGGC ACACCATCAC CGGGCGGCAA CACTTCTTTG TTGACCACGA CTGGATGCAA
GCACTGGGAG AACAATTCCC GGTGTACCGG CCCCCATTGG ACATGGCCCG CCACTTTGGG
GACCAAGGGT TCACCGACGA CGGCGATGCC GGAGTCACCG TACGGTACTT GACTCCGCAC
TCCAAGTGGT CGATCCACTC CCAGTATCAA GACAACCCCT ACATGCTGGG TCTTTCCCGT
GGCGGTCCCG TCATATGGCT CTCCGTCGAG GACGCTAATA AAGCGGGCAT TGCTGACAAT
GACTGGATCG AAGCAGTCAA CCGAAACGGG GTGGTGGCGT GCCGTGCTGT GGTGTCCCAC
CGTATGCCAC AAGGCACTGC GTACATGTAC CACTCAAAAG ACCGCAACAT TGACGTCCCC
AAAACAGAGA CGTCCGGCAA ACGTGGTGGT ATCCACAACT CACTGACCAT GATCATGATG
AAGCCCTCGC ACTTCCTTGG TGGTTATGGC CAGTTCACCT ATGCGTTCAA CTATTACGGC
CCCACCGGAA ATCAGCGTGA TGAGTTCACG GTGATCCGCC GCCGCACCCA GGAGGTTCAG
TACTGA
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| Protein sequence | MTAPTNESMS PLVKKLLASR GLLPHTEVFD NSHAYVETNP SEWDEFYRNR WSHDKIVRST
HGVNCTGSCA WDVYVKDGLI TWEHQGTNYP TTGPDSPEYE PRGCPRGASF SWYTYSPGRV
KYPYIRGVLL ELYLKAKKEH PDPVDAWESI VTSPLKSAMY KTARGKGGLV RANWELATEI
MAAAHVYTIK NFGPDRCVGF TPIPAMSMAS FGVGTRFLSM IGGTLLSFYD WYADLPPASP
QIWGDQTDVP ESGDWWNAGY IMMWGSNIPV TRTPDAHFLA EVRYKGTKVV AVSPDYAENV
KFADDWLAPA PGTDGALALA MGHVILTEFY RDRTVEYFTR YAKKFTDSPF LVSLDKGDND
GTYRVGKFLT AADLNPTSVH GATGDRAEFR PVFLDSVTNS VTVPNGTLAD RWTDEGKGRW
NLDLDGQDPH LTLLDTTYQG QTASSATVLM PRFDEGATEG GSTITRGVPT LTIDGHVVTT
VFDLLLANYG VGRDGLPGQW PTGYDDASVL GTPAWQENLS GVTGEQCARI AREFARNAEM
TQGRSMIVMG AGTNHWYHSD TIYRTFISLL TMTGCQGVNG GGWAHYVGQE KARPVTGQQH
MSFALDWQRP TRHMAGTAFW YTATDQWRYE GFDADEFTSP AAAKGFTRSA IADCLAQAQR
LGWTPAHPGF DRNPLDICDQ AQEAGKTVPT YVVDELKGGR LKFAMEDPDN PVNFPRVLTL
WRSNLIGNSA KGNEYFLKHL LGTTDAIRGK ETPPENRPKD IVWREKAAEG KLDLLTNIDF
RMTGTSLFSD IVLPAATWYE KQDLSTTDMH PFVHALNAAI TPAWESRTDY DAFLGLADKV
SELAHTHLGT RTDVIAAPLT HDTPDEMAQP HGIVRDWKDG ECDPIPGVTM PRLVTIERDY
TKIGEKMRAV GPLISSAGTT IKGVTIVPDS AISHLEKANG VQRSGIGQGR PRLDTAAHFC
EAILALSGTT NGAVSVAGFK ALEQRTGVTM HDLAEENEER IITFPQALSG PQPVFTSYEW
SGSEKGGRRY SPFTINVERD KPWHTITGRQ HFFVDHDWMQ ALGEQFPVYR PPLDMARHFG
DQGFTDDGDA GVTVRYLTPH SKWSIHSQYQ DNPYMLGLSR GGPVIWLSVE DANKAGIADN
DWIEAVNRNG VVACRAVVSH RMPQGTAYMY HSKDRNIDVP KTETSGKRGG IHNSLTMIMM
KPSHFLGGYG QFTYAFNYYG PTGNQRDEFT VIRRRTQEVQ Y
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