| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1229 |
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| Symbol | rpsA |
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| ID | 8380406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1313435 |
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| End bp | 1314901 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003977 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_003161188 |
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| Protein GI | 256832461 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.964467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.190984 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCT CTACCCCACA GGTTGCCGTC AACGACATCG GCACTGAGGA AGACTTCCTC
GCAGCGATTG ACGCCACCAT CAAGTACTTC AACGACGGCG ACATTGTTGA AGGCACGATC
GTCAAAGTAG ACCGCGACGA GGTTCTCCTC GACATCGGCT ACAAAACCGA AGGTGTCATC
CCTTCGCGCG AACTGTCCAT CAAGCACGAT GTCGACCCGG GTGAGGTTGT CAACGTCGGC
GACTCGGTCG AGGCTCTTGT TCTCCAGAAG GAAGACAAAG AAGGACGCCT GATCCTGTCG
AAGAAGCGCG CACAGTACGA ACGTGCGTGG GGCACCATCG AAAAGATCAA GGAAGAAGAC
GGAGTCGTTA CCGGTACCGT CATCGAGGTT GTCAAGGGTG GACTGATCCT CGACATCGGC
CTGCGCGGCT TCCTTCCTGC ATCACTCGTT GAAATGCGTC GCGTCCGCGA CCTTCAACCA
TACGTTGGCA AAGAAATCGA AGCGAAGATC ATCGAGCTCG ACAAAAACCG CAACAACGTT
GTGCTTTCAC GTCGTGCATG GCTCGAGCAG ACTCAGTCTG AAGTTCGCTC CACCTTCCTG
CAGACCCTCC AAAAGGGCCA AGTTCGCCCC GGTGTTGTCT CCTCGATCGT CAACTTCGGT
GCGTTCGTTG ACCTCGGTGG TGTTGACGGT CTCGTCCACG TGTCTGAGTT GTCGTGGAAG
CACATCGACC ACCCCAGCGA AGTTGTTGAG GTCGGTCAAG AGGTCACCGT TGAGGTACTC
GACGTCGACT TCGACCGTGA GCGTGTGTCC CTGTCGCTGA AGGCAACCCA GGAAGACCCA
TGGCAGACCT TCGCCCGCAC CCACGCGATC GGGCAAGTTG TTCCAGGTAA AGTCACCAAG
CTCGTTCCAT TCGGTGCGTT TGTGCGTGTC GAAGACGGCA TTGAAGGCCT CGTGCACATC
TCTGAGCTTG CAGTACGCCA CGTTGATCTG CCCGAACAGG TCGTCAACGT CGGTGATGAC
GCATTCGTCA AGGTCATCGA CATTGACCTT GAGCGTCGTC GGATTTCGCT CTCCCTTAAG
CAAGCAAACG AGGGTGTGGA CCCAGAGTCC GAAGAGTTCG ACCCAGCACT GTACGGAATG
GCTGCTGAGT ACGACGAGCA GGGTAACTAC AAATACCCAG AAGGCTTCGA CCCTGAGACC
GAAGAATGGC TCGAGGGCTA CGAAACTCAA CGTGAAGCTT GGGAAGCAGA ATATGCTGCA
GCTCACTCAC GCTGGGAAGC TCACCGCAAG CAGGTTGCCG CTGCACAGAA GGCTGACGCC
GAGGCAGCAG CAACAGCCGG CGAAGCAGCC GCAGAAGATG CACCCGCATC CTACTCGTCC
AACGCTCAAG CTGAGGTCGC TGCAGAAGGA ACCCTGGCTT CGGATGAAGC TCTTGCCGCT
CTGCGCGAAA AGCTCACCGG TAACTGA
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| Protein sequence | MTISTPQVAV NDIGTEEDFL AAIDATIKYF NDGDIVEGTI VKVDRDEVLL DIGYKTEGVI
PSRELSIKHD VDPGEVVNVG DSVEALVLQK EDKEGRLILS KKRAQYERAW GTIEKIKEED
GVVTGTVIEV VKGGLILDIG LRGFLPASLV EMRRVRDLQP YVGKEIEAKI IELDKNRNNV
VLSRRAWLEQ TQSEVRSTFL QTLQKGQVRP GVVSSIVNFG AFVDLGGVDG LVHVSELSWK
HIDHPSEVVE VGQEVTVEVL DVDFDRERVS LSLKATQEDP WQTFARTHAI GQVVPGKVTK
LVPFGAFVRV EDGIEGLVHI SELAVRHVDL PEQVVNVGDD AFVKVIDIDL ERRRISLSLK
QANEGVDPES EEFDPALYGM AAEYDEQGNY KYPEGFDPET EEWLEGYETQ REAWEAEYAA
AHSRWEAHRK QVAAAQKADA EAAATAGEAA AEDAPASYSS NAQAEVAAEG TLASDEALAA
LREKLTGN
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