| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1226 |
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| Symbol | |
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| ID | 8380403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1308406 |
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| End bp | 1311087 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645003974 |
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| Product | DNA polymerase I |
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| Protein accession | YP_003161185 |
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| Protein GI | 256832458 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.826859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACCCA GACTGCTCAT CATCGACGGA CACTCCATGG CTTTTCGCGC GTTTTTCGCG
CTCCCGGCCG ATAAATTTAT GACGTCGGGA GGTGCCTACA CCAACGCCGT CCACGGGTTT
ATTTCCATGT TGGCCACACT CATCAAAAAT GAACAGCCCA CCCACGTTGG TGTCGCCTTC
GATGCGGGAG CTCACACATT CCGCACTGAG GTGTTCCCAC AGTACAAAGG AACCAGAGAC
GCAACTCCCG AGCCGTTCAA AGGTCAGGTC GCACTGATCA AAGAAGTTCT TGACGCGATG
AACATTCGCT ACCTGGAAAA AGACCGATTC GAAGCTGACG ATATTCTTGC TACTTGGTCC
ACCTGCGCGG CAGAAGCCGG TATGGAGGTC CTGCTGTGTT CAGGTGACCG TGACACCCTC
CAACTCGTTA ACGATCATGT CACTGTGTTA TACCCCGTCA AAGGCGTGTC AGAACTCAAG
CGCTACACAC CAGAGGCGGT CGAAGAAAAA TATGGTGTTC GCCCCGAACA ATACCCAGAC
CTTGCAGCCC TCGTTGGTGA AACCTCAGAC AACATTCCTG GGGTCCCAGG AGTAGGTCCC
AAGACCGCCG CGAAGTGGGT CAACCAGTTT GGCAGCCTGA CCGAAGTGCT GAACTCAGCC
GAGACCATTA AGGGAAAAGT GGGGGAAAAG CTTCGCGACC ACCTCGACCA AGTGCGCCAA
AACCGTGAAA TCAACCGTCT CCTGACAGAC GTTGACCTCG ACGTCATGCC CAATGATCTC
ACCGTCCAAC AATGGGACCG GAATAAGCTT CACGAAATCT TTGACATGCT GGAGTTCCGC
ACCTTACGCG AACGCCTGCT TGCCATGATG GGGGCAGTCG ACCAGGGAAC GCACGATGAA
GGCGGTGCAG CGCAGGGCGC TTCGACGCAG ATCATGGAGG TGGCCGCGGG GGAGTTGGCA
CAATGGCTGA GCTCAACACG ACAACCGATG GGTCTGGCTG TCGCAGGAAA AGGCGTTCCA
TCACGCGGGA CCGCATGGCA GATCGCGCTC AGCGCGACAC CAGAGTCCGC CGTCGTTGTT
ACCCTCGATG AGTTAAGTGA CGCTGATAGC GTCGCCCTAC GCCAGTGGCT CATGGACCCT
CACTACCCCA AGATCGTCCA CAGCGCGAAA GAGGCATGGC ACGCGCTCCA CAGCTTCAGC
GGCGGTGTTA AAGGTGTGAT CGCAGACACT GAACTTGCCG CCTACCTGGC GTTTCCTGAC
CAACGTTCCT ACGGGCTCGA AGACCTCTCC ATCCGCTACG TGTCACGTGA CATCACCCCT
GTGGCACACC AAGCACAAGG ATCACTGGAC CTTGGTTTGG ATGACACAGA CGATGCGCTG
CGAGCGCTGG CTAACCGTGC GGCGGTATTG CCTCAGCTAG CTCAGGCGTT GGATGCTGAA
TTGTCGGATC GTTCGTTGAC TGCGTTGTAC CAAGAGATGG AATTGCCTCT TACTGTGGTT
CTTGCTCAGA TGGAACACGT GGGTGTGGCT GTTGACCTGG AGCAGCTTCG CTCTTTGGAT
GCTTTCTTTG CTCACCAAGG AAGCGAGGCT CAAAAAGCGG CGTTTGAGGC GATTGGTCGA
CAGGTGAATC TTGGGTCGCC TAAGCAACTG CAGGAGGTGT TGTTTGACCA GCTTGACATG
CCGAAGACGA AGAAGATTAA AACTGGTTAC ACCACTGATG CGGCATCACT TGCTGACTTG
TTCGTGAAAA CTGGGCACCC GTTTTTGCAG CATCTGCTGG AGTATCGTGA CTCGACGAAG
TTGCGGCAAA CAGTTGAGGG GTTGTTGAAG TCCGTTGCAG ATGATGGTCG TGTGCACACC
ACCTTTCAGC AAACGGTGGC TGCCACTGGT CGGCTGTCGT CCACAGACCC TAATTTGCAA
AACATCCCGA TCCGTACTGA AACAGGTCGG CGTATCCGGC AAGGTTTTGT TGTCGGTGAG
GGGTTGGACA CTCTTTTAAC TGCGGACTAT TCGCAAATTG AGATGCGGAT CATGGCTCAC
CTCTCTCAAG ATGACGGGCT GATTAGTGCT TTCCAAGCAG GTGAGGACCT CCACAATTTT
GTGGGTGCCC GGGTTTTTGG TGTGTCGATC GATGAGGTGA CCCCTCAGAT GCGTTCCAAG
GTAAAAGCCA TGAGTTATGG GCTCGCCTAT GGGTTGTCTG CCTTTGGTTT GTCGAAACAG
CTCAACATCA GTGTGGGGGA GGCCTCCACA CTGATGGATG ACTACTTCAC CCGGTTTGGT
GGGGTGCGTG ATTACCTCAC CTCAGTTGTT GCCCGTGCAC GAACAACGGG ATACACCGAG
ACGATCATGG GCAGGCGCCG TTATCTGCCA GATCTCACCA GTGATAACCG GCAGCGCCGA
GAAAACGCGG AGCGTGTTGC GTTGAATGCT CCTATTCAAG GCAGTGCTGC AGATGTGATT
AAGCAAGCAA TGTTGGGGGT AGATGCTGCT TTCAGGAGTG AAGGGCTTTC CTCACGTCTT
CTGCTTCAGA TACACGACGA ACTGATTGTG GAAGTGGCTC CCGGAGAGCA AGAAATCGCT
GAGCGCATTG TCCGGGAAGA GATGGCTGGA GCGATGCAGT TGTCCGTCCC GTTGGCGGTG
TCTGTTGGCA CTGGGCAAAA CTGGCATGAC GCGGGGCACT AG
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| Protein sequence | MRPRLLIIDG HSMAFRAFFA LPADKFMTSG GAYTNAVHGF ISMLATLIKN EQPTHVGVAF
DAGAHTFRTE VFPQYKGTRD ATPEPFKGQV ALIKEVLDAM NIRYLEKDRF EADDILATWS
TCAAEAGMEV LLCSGDRDTL QLVNDHVTVL YPVKGVSELK RYTPEAVEEK YGVRPEQYPD
LAALVGETSD NIPGVPGVGP KTAAKWVNQF GSLTEVLNSA ETIKGKVGEK LRDHLDQVRQ
NREINRLLTD VDLDVMPNDL TVQQWDRNKL HEIFDMLEFR TLRERLLAMM GAVDQGTHDE
GGAAQGASTQ IMEVAAGELA QWLSSTRQPM GLAVAGKGVP SRGTAWQIAL SATPESAVVV
TLDELSDADS VALRQWLMDP HYPKIVHSAK EAWHALHSFS GGVKGVIADT ELAAYLAFPD
QRSYGLEDLS IRYVSRDITP VAHQAQGSLD LGLDDTDDAL RALANRAAVL PQLAQALDAE
LSDRSLTALY QEMELPLTVV LAQMEHVGVA VDLEQLRSLD AFFAHQGSEA QKAAFEAIGR
QVNLGSPKQL QEVLFDQLDM PKTKKIKTGY TTDAASLADL FVKTGHPFLQ HLLEYRDSTK
LRQTVEGLLK SVADDGRVHT TFQQTVAATG RLSSTDPNLQ NIPIRTETGR RIRQGFVVGE
GLDTLLTADY SQIEMRIMAH LSQDDGLISA FQAGEDLHNF VGARVFGVSI DEVTPQMRSK
VKAMSYGLAY GLSAFGLSKQ LNISVGEAST LMDDYFTRFG GVRDYLTSVV ARARTTGYTE
TIMGRRRYLP DLTSDNRQRR ENAERVALNA PIQGSAADVI KQAMLGVDAA FRSEGLSSRL
LLQIHDELIV EVAPGEQEIA ERIVREEMAG AMQLSVPLAV SVGTGQNWHD AGH
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