| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1220 |
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| Symbol | |
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| ID | 8380397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1302657 |
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| End bp | 1304120 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003967 |
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| Product | glutamate synthase, NADH/NADPH, small subunit |
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| Protein accession | YP_003161179 |
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| Protein GI | 256832452 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.462072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.673117 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATC CACGTGGGTT TTTGAAGGTT CGTGAGCGGG AGCTTCCTGG ATATCGTCCG
GTGAGTGTGC GGTTGATGGA TTATGCGGAT GTGATGGTGA AGCGTGATCC GACGTCGCCT
TATTTGGCGC GGCAGGCGTC TCGTTGTATG GATTGTGGGA TCCCGTTTTG TCATCAGGGG
TGTCCGTTGG GAAATCTCAT TCCTGATTGG AATGATTTGG TGCGGCGTGG CTTGTGGCGT
GAGGCGAGTG ATCGGTTGCA TGCGACGAAT AATTTCCCGG AGTTTACTGG GCGTGTGTGT
CCTGCTCCGT GTGAGGACAG TTGTGTGTTG GGGATTAGTC AGCCTGCGGT GACGATCAAG
AATATTGAAG TGTCGATTGT TGATGAGGCT TTTCGGCAGG GTTTTTTGCC TCCTGTTGTT
CCTGAGCGGT TGTCGGGGAA GACGGTGGCT GTTATTGGGT CTGGGCCGGC TGGGTTGGCT
GCGGCGCAGC AGTTGACTCG TTCTGGTCAT ACGGTGGTGG TGTTTGAGCG GGATGAGGCT
GTGGGTGGGC TTCTTCGGTT TGGGATTCCT GATTTCAAGT TGGAAAAGCA CCATATTGAT
CGCCGTATTG AGCAGATGGT TGCTGAGGGG ACACGTTTTC GGGTGTCGAC CCAGGTGGGT
GTGGATGTGT CGTGGGCTGA GGTCTATGAG ACGTTTGATG CGGTGGTGGT GGCGACGGGG
GCTCCGGTTC CTCGTGATTT GCCGTTGCCG GGTCGTGATT TGGGTGGGAT TCATTTCGCG
ATGGATTATC TTGTGCGTTC GAATAGGCAG TGTCGTGGCT CTGAGGTGAG TGACCCTATT
GATGCGCGTG GTAAGCATGT CATTGTTATT GGGGGTGGGG ACACGGGGTC TGACTGTATT
GGGACGGCGT TACGTCAGGG TGCTGCGAGT GTGACGAACC TGGCAATTGG TGTGGAGCCT
CCCAAGGTGC GTCCGGAGAG TGAACCGTGG CCGGTGACGC CACGCCTGTT TGAGGTCTCG
AGTTCTCATG AAGAGGGTGG GTCTCGGGAG TTTTTGGCGT CGACTGTGGA GTTTGTGGGT
TCACATGGGC AGGTTGAAGC GTTGCGGGTT GCGACGACTG AGTATTTGTC TGATGGTCGA
CGTGTGCCCA CCGCTGGGAC GGAACGGGAT CTTCCTGCCG ATCTTGTGTT GATTGCGTTG
GGGTTCACGG GCGCTGAGAC AGACACGTTC GTGGACAGTG CTGCGCTTTC TTGTGATAAG
CGGGGTAGAA TCGCACGGAC GGACGAATAT GAGTCCTCAA TGCCGGGTGT CTTTGTCGCT
GGCGACGCAG GTCGCGGACA ATCTCTCATC GTGTGGGCGA TTGCAGAGGG ACGGGCGGCG
GCAGCGAGTG TCGATGAATA TCTGCAGGGA GGAACTGAGC TTCCTCGACC AGTGAAAGCA
TCGACCATGG CGTTGCGTCC CTGA
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| Protein sequence | MADPRGFLKV RERELPGYRP VSVRLMDYAD VMVKRDPTSP YLARQASRCM DCGIPFCHQG
CPLGNLIPDW NDLVRRGLWR EASDRLHATN NFPEFTGRVC PAPCEDSCVL GISQPAVTIK
NIEVSIVDEA FRQGFLPPVV PERLSGKTVA VIGSGPAGLA AAQQLTRSGH TVVVFERDEA
VGGLLRFGIP DFKLEKHHID RRIEQMVAEG TRFRVSTQVG VDVSWAEVYE TFDAVVVATG
APVPRDLPLP GRDLGGIHFA MDYLVRSNRQ CRGSEVSDPI DARGKHVIVI GGGDTGSDCI
GTALRQGAAS VTNLAIGVEP PKVRPESEPW PVTPRLFEVS SSHEEGGSRE FLASTVEFVG
SHGQVEALRV ATTEYLSDGR RVPTAGTERD LPADLVLIAL GFTGAETDTF VDSAALSCDK
RGRIARTDEY ESSMPGVFVA GDAGRGQSLI VWAIAEGRAA AASVDEYLQG GTELPRPVKA
STMALRP
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