Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1219 |
Symbol | |
ID | 8380396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1298087 |
End bp | 1302664 |
Gene Length | 4578 bp |
Protein Length | 1525 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645003966 |
Product | Glutamate synthase (ferredoxin) |
Protein accession | YP_003161178 |
Protein GI | 256832451 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.589961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.962678 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAACG AGCACCAGGT ACGCAGTGAC GCCACGACGC TGTGGGGCAC ACGAACTCAA CCTATTGGTT TGTACAACCC TGAAGACGAG CATGACGCAT GTGGTGTTGC TTTTGTTGCT TCTCTTACAG GTGGGCCGAG CCACGACATT GTCGAACAAG GTCTTACTGC ACTCATCAAT CTAGACCATC GAGGTGCAGT GGGCGCTGAA GTGAATACTG GCGATGGCGC CGGGATCCTC ACACAGATCC CGCATCAGTT CTACCAGAGT GTCATCAACG ACCTTCCCCA ACCAGGTGCT TACGCAACTG GGCTTGGTTT CTTTGCCACC GACGACGTTC TGCGGTCACA GGAACAAGAC ACGGTGGCAC GCATCGCCAC TGAAGAGGGC CTTTGTGTCC ACTCGTGGCG TGATGTTCCC ACTGATGCTT CCTCAGTGGG ATCGATGGCG CTATCCACGA TGCCTCACTT CGCCCAGGTG GTCGTGACAG CACTGGATTC CACTGTCACG GGGGCTGCAC TGGAACGCCT GGCTTACCGC CTGCGGAAGC GGACAGAACA TGAAGCAGGA GTGTTTTTTG CTTCGTTGTC GTCGCGCACT GTCACCTACA AAGGAATGCT CACTGTTGAA CAGTTGCGCC CATTCTTTCC TGACCTTCAT TCTCCGCTCT ACACTTCGCA GCTCGCCCTC GTTCATTCCC GTTTCTCTAC CAACACATTC CCTTCCTGGC CATTGGCCCA GCCTATGCGC ATGATCGCGC ACAACGGTGA AATCAACACT GTCCGAGGGA ACAGAAACTG GATGGCCGCG CGTCAAGGGA CCCTCGCGTC CCCCGTTCTT GGCGATGTGG CCCCATTGCT GCCGATCTGC ACGCCAGGGG CATCAGATTC GGCGTCCTTT GATGAAGTCC TGGAACTGCT TCACCTGGGC GGGCGGCCGT TGCCGCATGC GGTGATGATG ATGATTCCCG AGCCCTGGGA AAACCACCAA CACATGAGTG CGGAACGCCG GGCGTTCTAC GAATATCATT CACATCTTAT TGAGCCGTGG GATGGGCCAG CATGTTTAAC TTTCACTGAC GGCACACTTA TTGGCGCTGT GCTCGACCGC AACGGTCTAC GCCCGGGTCG ATTCTGGGTC ACCCACGACG GGCTGGTTGT CCTTGCTTCG GAGGCTGGTG TCCTCGACAT TGCACCAGAG CGCATTGCGC AACGTGGACG CCTCGAACCA GGAAAAATGT TCCTCGTGGA CACCGCTGCA GGTCGCATCA TTCCTGACGA AGAGATCAAA ACTGAAGTTG CTTCAGAAAA CCCTTATGCG CAGTGGGTCA AGGATCACGC GATTCGACTC GATGAATTGC CTGACCGTGA ACATGTCACC CATTCCTCTG CGTCGGTGGA ACGCCGGCAA CGCGCATTTG GGTACACCCA TGAAGAGCTC AAAATCCTGT TGACTCCTAT GGCAGAAACA GGCGCTGAAC CGCTGGGGGC GATGGGCTCT GATACCCCCA TCGCGGTGCT GTCAACTCGC CCGCGTTTGC TTTTCGATTA CTTCACTCAA ATGTTTGCAC AAGTCACCAA CCCGCCACTG GACTCCATCC GCGAACAACT AGTGACGTCA ATTGGTGGGG CAATCGGGCC CGAGCCGAAC CTGTTGGAGT CCACCCCCCT TCACGCGCGC AAGCTCATTT TGTCATTTCC CGTGATCTCC AACGATGACT TGGCGAAAAT CATCCACATC AATCGCGCGT CACACCCAGG TGCTCAGTTC ACCTCAATGA CTGTACGGGG TCTATACCGC GTCCATGATG GTGCTCAAGG GCTTGAGTCT CGACTGGCAG AGATCTTCCG TGAGGTTGAT GAAGCTGTTG CAGGCGGAGT CAGTTTCATC GTGTTGTCAG ACCGTAACAG TTACTCTGAG TACGCACCTA TCCCGTCACT TTTGTTGCTG TCTGCTGTGC ATCACCATCT TGTCCGACGG CAAACGCGCA CTCAAGTGTC GTTGATCGTT GAGGCGGGGG ACGTTCGTGA GGTGCATCAT GTTGCGTTGC TCATTGGCTA TGGGGCAGCT GCAGTTAACC CTTATCTTGC TATGGAGAGT GTCGAAGAAC TAGCACGGAC CAACCAGCTC TCTGTCGCCC CAGACGTTGC CGTAGCGAAC CTCATTACGG CACTGGGCAA AGGGGTTCTC AAAGTGATGT CTAAGATGGG AATCTCGACA ATTTCGTCCT ACCGTGGTGC ACAAGTATTT GAAGCAGTGG GATTGTCCCA ACAGCTCATT GACGATTACT TCACGGGAAC CACCTCGCGT CTGGGCGGAA TCTCACTTGC CGATGTTGCC CGCGAATCCG AAGCACGCCA CCGCGATGCA TACCCACTGT CGGGAAGCCC ACAACCACAT CGCACCTTGC GTGTCGGCGG TGAATACCAG TGGCGGCGCG AAGGTGAAGA GCACCTCTTT GATCCAGAGA CCGTGTTTGC GTTGCAGCAC GCGACTCGAA CAAAACGTTT CGACATCTTT CGCAAGTACA CAGGGCGCGT CAATGAGCAA ACCCAGCGTC TGATGACAAT TCGTGGACTG CTTGAGTTTG CTCCCACACG GCCAGCCGTT CCTCTCGACG AGGTGGAGCC GATCAGCTCT ATTGTCACCC GCTTCAATAC CGGTGCGATG TCCTACGGAT CTATCTCTCA AGAAACCCAC GAAACGCTTG CTATCGCGAT GAACCAACTG GGAGGACGTT CCAATACGGG CGAGGGCGGC GAGCATCCTG AACGCCTTTA TGACCCTCAA CGCCGTTCAC GAGTCAAGCA GATTGCTTCA GGACGCTTTG GTGTGACCTC TGAGTACTTG GTGAACGCGG ATGATATCCA AATCAAGCTG GCACAAGGTG CGAAGCCAGG AGAAGGAGGA CAACTCCCAG GGAATAAGGT GTACCCCTGG GTTGCTGAAA CCCGTCACTC AACCCCCGGG GTGGGGCTCA TTTCACCGCC ACCCCACCAC GATATCTACT CCATTGAAGA TCTTGCTCAA CTTATTCATG ACGCGAAGAG CGCTAACCCG CGAGCGCGTA TTCATGTGAA GTTGGTGTCG GAGCATGGGG TGGGCACTGT TGCTGCTGGT GTGTCGAAGG CACATGCGGA TGTGGTGTTG ATTTCTGGTC ATGATGGGGG GACTGGTGCG AGTCCGTTGA CGTCGTTGAA GCATGCGGGT ACTCCGTGGG AGTTGGGGCT TGCGGAGACG CATCAGACTC TTGTGCTCAA TGATTTGCGT GATCGGATTA CGGTGCAGGT TGATGGTCAG TTGAAGACTG GTCGTGATGT GGTGATTGCT GCGCTTCTTG GTGCGGAGGA GTTTGGTTTT GCGACGGCTC CGATGGTGGT GTCTGGGTGC ATCATGATGC GGGTGTGTCA TTTGGATACG TGTCCTGTTG GGGTGGCGAC GCAGAATCCG GAGTTGCGTG AGCGGTTTAC TGGCAAGCCT GAGTTTGTGG TGAATTTTTT TGAGTTCATT GCGCAGGAGG TTCGTGAGCT GTTGGCGGAG TTGGGGTTCC GGAGTATTGA TGAGGCTATT GGTCATGTTG AGGCGTTGCG GGTGAATGGT GAGGCTGGGC ATGTGAAGAC GTTGGGGCTT GATTTTTCTC CGATTCTTGC TCCTTCTGTG CCGCTTCCTG GTAGTGATGT GAAGAAGCGT GTTGAGCAGG ATCATGGTCT TGCTGATGCG TTGGATGTGG AGTTGATTGC GGGGGCGGAG CCTGCTCTTG AGCGTGGTGA GCCGGTTGTG TTGTCTGCTC GGGTGCGTAA TGTGCATCGG ACTGTGGGGA CGATTCTGGG TTATGAGGTG ACGCGTCGGT ATCGGGGTGA GGGTTTGCCT GAGGGGACGA TTGTGGTGAA TCTTGTGGGT ACTGCGGGGC AGTCGTTGGG TGCTTTTTTG CCGCGTGGTG TGGATCTTCG TGTGGTGGGG GAGGCCAATG ATTATGTGGC GAAGGGGTTG TCTGGTGGGA CTGTTGTCGT GAGTTGTCCT GCTGATGCTG GTCATGGGGC TGAGGGCAAT GTGATTGCGG GGAACGTGGT TGGGTATGGT GCGACGTCGG GGAAGGTGTT TATTAACGGG CGTAGTGGTG AGCGGTTTGC GGTGCGTAAT TCGGGTGCGT CTCTTGTTGT GGAGGGTATT GGGGACCACG GGTTGGAGTA CATGACTGGT GGTGAGGTGT TGATTGTGGG GCCGACTGGG CGCAATTTGG GTGCAGGGAT GTCGGGTGGT GTGGCGTGGG TGTTGGATCT TGATTCGTCG TGTGTGAATC CTGCTGCGGT GGACAGTGGT GAGTTGTTGT TGGAGGGGCT TGATGAGGGG GATGCTGCTC GGGTGGTTGC TTTGCTTGAG GAGCATGTTC GGTTGACGGG TTCTGTGATG GCGTCAACTT TGCTTGCGGA TGTGCCTGCG TCGTTGGGTC GGTTCACGAA GGTTGTTCCG CGGGACTTTG TTCGGATGCG GGCGGCGTTG GATCAGGCTC GTGTTGCTGG TCTTGATTTT TCTGCTCCTG GTGTGTGGGA CGAATTGTTG GAGGTGGCTC GTGGCTGA
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Protein sequence | MRNEHQVRSD ATTLWGTRTQ PIGLYNPEDE HDACGVAFVA SLTGGPSHDI VEQGLTALIN LDHRGAVGAE VNTGDGAGIL TQIPHQFYQS VINDLPQPGA YATGLGFFAT DDVLRSQEQD TVARIATEEG LCVHSWRDVP TDASSVGSMA LSTMPHFAQV VVTALDSTVT GAALERLAYR LRKRTEHEAG VFFASLSSRT VTYKGMLTVE QLRPFFPDLH SPLYTSQLAL VHSRFSTNTF PSWPLAQPMR MIAHNGEINT VRGNRNWMAA RQGTLASPVL GDVAPLLPIC TPGASDSASF DEVLELLHLG GRPLPHAVMM MIPEPWENHQ HMSAERRAFY EYHSHLIEPW DGPACLTFTD GTLIGAVLDR NGLRPGRFWV THDGLVVLAS EAGVLDIAPE RIAQRGRLEP GKMFLVDTAA GRIIPDEEIK TEVASENPYA QWVKDHAIRL DELPDREHVT HSSASVERRQ RAFGYTHEEL KILLTPMAET GAEPLGAMGS DTPIAVLSTR PRLLFDYFTQ MFAQVTNPPL DSIREQLVTS IGGAIGPEPN LLESTPLHAR KLILSFPVIS NDDLAKIIHI NRASHPGAQF TSMTVRGLYR VHDGAQGLES RLAEIFREVD EAVAGGVSFI VLSDRNSYSE YAPIPSLLLL SAVHHHLVRR QTRTQVSLIV EAGDVREVHH VALLIGYGAA AVNPYLAMES VEELARTNQL SVAPDVAVAN LITALGKGVL KVMSKMGIST ISSYRGAQVF EAVGLSQQLI DDYFTGTTSR LGGISLADVA RESEARHRDA YPLSGSPQPH RTLRVGGEYQ WRREGEEHLF DPETVFALQH ATRTKRFDIF RKYTGRVNEQ TQRLMTIRGL LEFAPTRPAV PLDEVEPISS IVTRFNTGAM SYGSISQETH ETLAIAMNQL GGRSNTGEGG EHPERLYDPQ RRSRVKQIAS GRFGVTSEYL VNADDIQIKL AQGAKPGEGG QLPGNKVYPW VAETRHSTPG VGLISPPPHH DIYSIEDLAQ LIHDAKSANP RARIHVKLVS EHGVGTVAAG VSKAHADVVL ISGHDGGTGA SPLTSLKHAG TPWELGLAET HQTLVLNDLR DRITVQVDGQ LKTGRDVVIA ALLGAEEFGF ATAPMVVSGC IMMRVCHLDT CPVGVATQNP ELRERFTGKP EFVVNFFEFI AQEVRELLAE LGFRSIDEAI GHVEALRVNG EAGHVKTLGL DFSPILAPSV PLPGSDVKKR VEQDHGLADA LDVELIAGAE PALERGEPVV LSARVRNVHR TVGTILGYEV TRRYRGEGLP EGTIVVNLVG TAGQSLGAFL PRGVDLRVVG EANDYVAKGL SGGTVVVSCP ADAGHGAEGN VIAGNVVGYG ATSGKVFING RSGERFAVRN SGASLVVEGI GDHGLEYMTG GEVLIVGPTG RNLGAGMSGG VAWVLDLDSS CVNPAAVDSG ELLLEGLDEG DAARVVALLE EHVRLTGSVM ASTLLADVPA SLGRFTKVVP RDFVRMRAAL DQARVAGLDF SAPGVWDELL EVARG
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