| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1210 |
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| Symbol | |
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| ID | 8380387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1289090 |
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| End bp | 1290937 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003957 |
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| Product | ABC transporter related |
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| Protein accession | YP_003161169 |
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| Protein GI | 256832442 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.269733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA CCTCCAGTAA TATCGCACAA ACATCCCAAT TAGGGGTGTG GGCGACTGTA
CGACGGGGCG TGGCAACAAC CCCGGAACTC GTTGATGGAT TATGGTGGAC CCTCCTGCTC
GCTCTTGCGG CAGCCGGTGG GAAAGTTGCG GTACCGATCG CGATTCAGCA AGCAGTCGAC
GCAACAACTG AATCAACTGC GGTGGTGTCG CAGCTCACCG GTATCCTCAC GATCGCGGTG
ATCGCCATCA TTGTGGCTGC TGGTGCCACC ATGATCGTGA ACATGAAACT CGTGTCGAAC
GCTGAACGAG CGCTGGCCCG CCTGAGGCGT GAAGCTTTTG ATCACATCCA CCAACTGTCC
ATCCTCACCC AAAACACCGA GCGCCGCGGC GCACTGGTGT CTCGGGTGAC CTCAGACGTT
GATACGATCT CGATGTTTGT GCAGTGGGGT GGGCTTATGC TCTTGACCTC GTTGTTGCAA
ATCGCTGCCG CCACGACCGT GATGCTTGTC TACTCCTGGC AGCTCACCCT GCTGGTGTGG
ATCACCTTCA TTCCGTTCAT GCTCATCCTG CGACCAGCGC AACAACGAGT GAACAGGAGT
TTTACCGCGG TACGGCAGCG CATGGGAGAA CTTCTCGGGA CTGTGTCTGA AACCGTTGTC
GGGTCAGCAA CTATCTATTC CAACGGGGTA GGGGCAACGT TCCGTGACCG TCTCATGGAC
CGTATTGAAG CGCATCGACA ATCAGGTGTG CAAGCCATGA CACGTGTGGC ACTAGCCTTC
TCCGCTGGAG TGTTTGCGGC GAACATCGTC CTTGTTGTTG TGATCGTTGC CGGCGCCTAT
CTGGGTGTGG CGGGGAACAT CAGCTCCGGC CAATTGGTGG CTTTCTTGTT CCTCACGCAA
TTGTTCACTG GACCCGTTCA ACTAGCCACC GAAGTTCTCA ATGAATTACA AAACGCTGTG
GCAGGATGGC GCCGTGTCCT GGCAGTTCTC GATACAGACG CCGACGTGAC GAGCCCAGTG
AGTACACGAG GTCAACGCTC CTACCAAGGA GGAGCAACAC TCGCACTTCA TGCAGTGGGA
TACCACTATC CTGGCGGCCC TCAAGTCCTC CATGATGTGT CACTGACCAT CCCAGCGGGG
ACACGCTACG CCATCGTGGG GGAAACTGGG TCAGGAAAGA CGACCCTAGC TAAACTCATC
ACACGATTTT CTGACCCCAC TCATGGGCAC ATCACCTTCG ATGGTATCGA CTTACGCGAC
TACTCAAATG AGGACTTGCG TGCTGCGATT TTGCTGATTC CCCAAGAAGG TTTCCTCTTT
CACGCAACAC TCGCACAGAA CATTGGGTAT GGATTAACTG TGCGCTACCC GACGATCACC
CCAGCAGAGC AAGAAGCGCA CATTGCTCGC GCCGTGAGCG AGTTAGGACT ACAGACCTGG
GTTGACACGC TACCGCAGGG CCTGAATACG TCCGTTGGGC AACGCGGGGA ACGCCTGTCA
GCGGGGGAGC GGCAACTCGT TGCACTCGCT CGTGCTTACT TGTCTCGAGC AGAGCTAATT
GTCATGGATG AAGTGACCTC GGCCGTTGAT CCAGCCACGG AGGTCATGAT TGCGCGCGCT
CTGGAAAAAC TCATGCAAGA GAAAACAACC ATCACCATTG CACACCGTCT CTCCACTGCA
GCAGTCAGTG ACGCCATCAT CGTGATGGAC CATGGAAAAG TGGTTGAGCA AGGAACACAC
ACAGAGCTTT TCCAGGCCGG AGGCCGGTAC ACAGACATGT ACAACGCCTG GATCAGCCAA
ACTACAACTG CAACCGCACG ACCAACGTCA CCAAGGACAT CATCATGA
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| Protein sequence | MKTTSSNIAQ TSQLGVWATV RRGVATTPEL VDGLWWTLLL ALAAAGGKVA VPIAIQQAVD
ATTESTAVVS QLTGILTIAV IAIIVAAGAT MIVNMKLVSN AERALARLRR EAFDHIHQLS
ILTQNTERRG ALVSRVTSDV DTISMFVQWG GLMLLTSLLQ IAAATTVMLV YSWQLTLLVW
ITFIPFMLIL RPAQQRVNRS FTAVRQRMGE LLGTVSETVV GSATIYSNGV GATFRDRLMD
RIEAHRQSGV QAMTRVALAF SAGVFAANIV LVVVIVAGAY LGVAGNISSG QLVAFLFLTQ
LFTGPVQLAT EVLNELQNAV AGWRRVLAVL DTDADVTSPV STRGQRSYQG GATLALHAVG
YHYPGGPQVL HDVSLTIPAG TRYAIVGETG SGKTTLAKLI TRFSDPTHGH ITFDGIDLRD
YSNEDLRAAI LLIPQEGFLF HATLAQNIGY GLTVRYPTIT PAEQEAHIAR AVSELGLQTW
VDTLPQGLNT SVGQRGERLS AGERQLVALA RAYLSRAELI VMDEVTSAVD PATEVMIARA
LEKLMQEKTT ITIAHRLSTA AVSDAIIVMD HGKVVEQGTH TELFQAGGRY TDMYNAWISQ
TTTATARPTS PRTSS
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