Gene Jden_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1208 
Symbol 
ID8380385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1286494 
End bp1287267 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID645003955 
Productimidazoleglycerol phosphate synthase, cyclase subunit 
Protein accessionYP_003161167 
Protein GI256832440 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.58775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTGG CTGTGCGTGT CATTCCCTGC CTTGACGTTG ATGCAGGTCG CGTCGTTAAA 
GGGGTCAATT TTGAGAATCT TCGTGATGCG GGGGATCCGG TAGAGCTGGC TTGTCGATAT
GGCCAGCAGG GCGCCGACGA GTTGACGTTC CTTGATGTCA CCGCGTCCTC AGGGAACCGG
GAAACCACGT ACGATGTGGT CCGCCGAACA GCGGAGGAGG TGTTTATTCC GCTGACGGTT
GGTGGGGGAG TGCGCACTCC TGATGATGTC GATAAGTTGT TGCGTGCTGG AGCGGACAAG
GTTGCTGTCA ATACTGCGGC GATTGCTGAT CCAACGTTGA TCACGGCTAT TGCTGATCGT
TTTGGTAGTC AGGTGCTCGT GCTGTCAGTT GATGCGCGCA GAGTTCAGGG GGATACACGA
ACTGAATCAG GGTATGAGGT GACGACCCAT GGCGGGCGTC GGGGGACGGG GATTGATGCT
GTTCAGTGGG CCATTGAGGG TGCGGAGCGT GGCGCTGGTG AGATTTTGTT GAATTCGATG
GATGCTGATG GCACGTACCA GGGCTTTGAC GTAGAGATGT TCACCGCGGT GCGTCGTGAG
GTGGGGATCC CGTTGATTGC GTCGGGCGGT GCTCACGAGC CGGGTGATTT CACTGAGATC
GCGCAGCATG GTGCGGATGC TGTTCTGGCC GCGAGTGTGT TTCACTTTGG CAAGCTCACT
GTCAACGATG TGAAGGATCA CATGGCAGAC CATGGAATTG AGGTGCGGCG CTGA
 
Protein sequence
MSLAVRVIPC LDVDAGRVVK GVNFENLRDA GDPVELACRY GQQGADELTF LDVTASSGNR 
ETTYDVVRRT AEEVFIPLTV GGGVRTPDDV DKLLRAGADK VAVNTAAIAD PTLITAIADR
FGSQVLVLSV DARRVQGDTR TESGYEVTTH GGRRGTGIDA VQWAIEGAER GAGEILLNSM
DADGTYQGFD VEMFTAVRRE VGIPLIASGG AHEPGDFTEI AQHGADAVLA ASVFHFGKLT
VNDVKDHMAD HGIEVRR