Gene Jden_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1202 
Symbol 
ID8380379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1280614 
End bp1282245 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content60% 
IMG OID645003949 
Productprotein of unknown function DUF245 domain protein 
Protein accessionYP_003161161 
Protein GI256832434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0256776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTAC GCAGAATCAT GGGCATCGAA ACCGAATACG GAATCACCCA ACAAGGCAAC 
CCGCGAGCCA ACCCCATGCT CATGTCCTCA CAAATCGTCA CAGCCTACCG CGCCGTATCA
ACCCAAGCAC GCCAGCACGC CCGCTGGGAC TACATCGATG AAGACCCCCT CGCCGACGCA
CGCGGATTCC GCCTCCAACG CGCCTCAGCA CACCCCTCAC TCCTCACCGA CGACCCCACA
ACCCCCGCCC CCTCCGGCGA CGACCACGGG GTCCACGCCC AACCCTTAGC CCGCCCCACC
ACCGAAACCT ACGACGACCC CTCCGCCGCA AACGCCATCC TCACCAACGG GGCACGACTC
TACGTCGACC ACGCACACCC CGAATACTCC TCACCAGAAG TCAGCAACCC ACGCGACGCT
GTTATCTGGG ACGCCGCCGG AGAACACATC ATGAGGTCCG CCGCACACCA CCTCCACCAA
TCCATGGGAA TCGACCTCCA ACTGTACAAA AACAACACAG ACGGCAAAGG CGCAAGCTAC
GGCACCCACG AAAACTACCT CGTCAAACGA GAAGTACCAT TTACCGACCT CGCAACCTTC
CTCACCTCAC ACTTCGTCAC CCGACAGATC TACACCGGCC AAGGACGAGT CGGACTGGGA
ACCACAGGAC AACAACCAGG ATTCCAAATC TCCCAACGAG CCGACTTCAT AGAAGCAGAA
ATCGGCCTGG AAACAACACT GCGCCGCCCC ATCATCAACA CCCGAGACGA ACCACACGCA
GACCGCTCAC GGTGGCGCCG CCTCCACGTC ATCATCGGAG ACGCCAACGT CATGCACCAC
CCCACCTGGC TCAAACTCGG AACAACATCA CTCATCCTGT GGGTCCTCGA ACACCTCGAC
AACCACCAAG ACCTCCACAA CGAACTCGCA GCCCTCACCC TGGCCAACCC CGTCGACACC
GTCCACCAAG TATCACGAGA CCTCACCTGC ACAACCCCAC TCACCCTCAC CAACGGCAAC
CAACTCACCG CAATCGAGAT ACAACGCCGC TACCTCAACA TCGTCACCAC TGCCCTCACC
CGCCACACCA ATGACATCGA CACCGACACA GCAGAAATCC TCACCGCCTG GGACCACACA
CTCACCCAAC TAACACACGA CCCACTCACC TGCCAACGAA CCATCGAATG GGTCGCCAAA
TACCGCCTCC TCAACGCCAT GCGCGAACGA CACAACCTCA CCTGGGACCA CCCCAAACTC
GCCATGATGG ACATCCAATG GTCAGACGTC CGACCCGAAC GCGGACTGTG CCGAACCCTC
CAACGCAAAG GACACATCGA CACACTCGTC ACCGACGACG ACATCACCCA CGCAATCGGA
CACCCACCCA CCGACACCAG AGCCTACTTC CGCGGCGAAG TCATGGACCG CTACCCCCAC
GTCGTTACCG GAGCAAGCTG GGACTCAGTC ATCTTCGACC TCCCCTCCTC ACCCACCCTG
CACCGCATCC CCATGACCGA CCCATGGCGC GGAACACAAA CACACGTCGG AACACTATTC
ACCCAACACC CCGACCCCAC AGAATTCGTC CACGCACTCA TGGGAACACC ACCCCCCAAC
ACAACCGGGT GA
 
Protein sequence
MTVRRIMGIE TEYGITQQGN PRANPMLMSS QIVTAYRAVS TQARQHARWD YIDEDPLADA 
RGFRLQRASA HPSLLTDDPT TPAPSGDDHG VHAQPLARPT TETYDDPSAA NAILTNGARL
YVDHAHPEYS SPEVSNPRDA VIWDAAGEHI MRSAAHHLHQ SMGIDLQLYK NNTDGKGASY
GTHENYLVKR EVPFTDLATF LTSHFVTRQI YTGQGRVGLG TTGQQPGFQI SQRADFIEAE
IGLETTLRRP IINTRDEPHA DRSRWRRLHV IIGDANVMHH PTWLKLGTTS LILWVLEHLD
NHQDLHNELA ALTLANPVDT VHQVSRDLTC TTPLTLTNGN QLTAIEIQRR YLNIVTTALT
RHTNDIDTDT AEILTAWDHT LTQLTHDPLT CQRTIEWVAK YRLLNAMRER HNLTWDHPKL
AMMDIQWSDV RPERGLCRTL QRKGHIDTLV TDDDITHAIG HPPTDTRAYF RGEVMDRYPH
VVTGASWDSV IFDLPSSPTL HRIPMTDPWR GTQTHVGTLF TQHPDPTEFV HALMGTPPPN
TTG