| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1182 |
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| Symbol | |
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| ID | 8380359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1255644 |
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| End bp | 1256390 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645003927 |
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| Product | Thiamine-phosphate diphosphorylase |
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| Protein accession | YP_003161141 |
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| Protein GI | 256832414 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0746327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0037864 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACCC AACCACGAAC AGTACCCCCG ACAACCTGGG CCTTGAATGA GGTATTACGG
GTGTGTGTGG TGCTGGATGA GAGTCATTGC GCAGCTGCGG GTAGGAGCGT GACCCAGACG
GTTGCGGACG CGGTTGCGGG TGGCGCCACC ATGATTCAAG TGCGGGCCAA AAACGCTGAT
GACCGAGAGT TTTACTCACT GATTGCGCAC GTGTGCGCAG TTGTCGATGG GCAAGTCCCC
GTCCTGGTCA ACGACCGGGT GGATCTGTTC CTTGCGGCAC GGATGGACAC GATGGCGGTT
GCTGGGGTTC ATGTGGGCCA GCGTGACCTG CCGGTGAGCG TGGTGCGCCG GTTGGTGGGG
CAGCACGCAC TGATTGGAGT GAGCGCATCA CGGAAAGAGG AAATCAGGAG CGCTAGCCAC
GATTGGGCAG CAGTGTCTTA CATCGGGTTG GGTGCGTTGC ATGCAACCGG AACAAAAGCT
GATGCTCCTG CCCCGTTAGG GCTTGAAGCG GTGGCCCAGC GCATTGAATT AGCGACCGTC
CCGACTGTGG TGATCGGTGG GATTACGGTG GCTGATGTGC CAGCTGTTCG GGCGGTAGGT
GCTGCAGGTG TGGCGGTGTC GTCTGCGGTG TGTGGTGCCC GTGACGCGGT CGCAGCTGCG
GCACAGTTTC GGAGCGCCTG GGATGGGACG CCCGTCGGGG TTGGCAAACA AGAAGGACAC
ACAACAACAG CAGGGGGCTC ACAATGA
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| Protein sequence | MTTQPRTVPP TTWALNEVLR VCVVLDESHC AAAGRSVTQT VADAVAGGAT MIQVRAKNAD
DREFYSLIAH VCAVVDGQVP VLVNDRVDLF LAARMDTMAV AGVHVGQRDL PVSVVRRLVG
QHALIGVSAS RKEEIRSASH DWAAVSYIGL GALHATGTKA DAPAPLGLEA VAQRIELATV
PTVVIGGITV ADVPAVRAVG AAGVAVSSAV CGARDAVAAA AQFRSAWDGT PVGVGKQEGH
TTTAGGSQ
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