Gene Jden_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1181 
Symbol 
ID8380358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1254874 
End bp1255647 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content62% 
IMG OID645003926 
ProductHydroxyethylthiazole kinase 
Protein accessionYP_003161140 
Protein GI256832413 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2145] Hydroxyethylthiazole kinase, sugar kinase family 
TIGRFAM ID[TIGR00694] hydroxyethylthiazole kinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.175871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00376241 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAGCTCC TGGATAGGGT GCGAGCCACC ACGCCACTTG TGCACTGTCT GACCAACTCG 
GTCGTCACTG GATTTACTGC CAACGCTCTG CTGGCGGTGG GAGCAACACC TGCCATGGTG
GATTTACCCG GTGAAGCAGG CCCGTTTGCT TCGGTGGCCG ATGCGATCCT CATCAACCTG
GGTACCCCGC ACGCCGCACA CCGTGACGCG ATGCTCGAGG CCGTCCAGGT GGCCCGCACT
CACGGTACGC CGTGGGTTCT TGACCCGGTG GCAGTGGGCA TACTTCCGAT CCGCACGGCC
CTTGCCGACC AACTACGAGG CGAACATCCC ACAGCGATCC GGGGGAACGC ATCGGAAATT
ATGGCGCTAG CGGGCGCGGG AAGCGGGGGG CGAGGCACCG ACGCCACGCA TAGTGTGGCG
GACGCACAAC ACGCGGCCCG CACTCTTGCC CACAGTACTG GTGGTGTTGT CGCCGTGTCT
GGTCCCACTG ATTTCATTAC AGACGGTGAC CGCGATATTT ATTTAGGTAA TGGTCACCGG
TTTTTGACTA CCATCACCGG GGGTGGGTGT GCTTTAGGTG CAGTGACTGC CGCGTTCTTG
GCTGTGCACG ACACCCCGCT TCTTGCGGTC ACCGGGGCGC ACATGGTGTA CACGATTGCC
GCACAACGAG CTGCCGACAA AGCACACGGA CCAGGGTCCT TTCAGGTGGC GTTCCTTGAT
GAGCTTGCCA CCGTGACGGG GGATGCCATT GTGGCGGAGG CGATCATCTC ATGA
 
Protein sequence
MELLDRVRAT TPLVHCLTNS VVTGFTANAL LAVGATPAMV DLPGEAGPFA SVADAILINL 
GTPHAAHRDA MLEAVQVART HGTPWVLDPV AVGILPIRTA LADQLRGEHP TAIRGNASEI
MALAGAGSGG RGTDATHSVA DAQHAARTLA HSTGGVVAVS GPTDFITDGD RDIYLGNGHR
FLTTITGGGC ALGAVTAAFL AVHDTPLLAV TGAHMVYTIA AQRAADKAHG PGSFQVAFLD
ELATVTGDAI VAEAIIS