Gene Jden_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1161 
Symbol 
ID8380338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1239302 
End bp1240213 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content57% 
IMG OID645003906 
Producthypothetical protein 
Protein accessionYP_003161120 
Protein GI256832393 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.799724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTCCC AACCGCGTTC TTTTCTCCAG TGGTTGGGGA TTGCTTTGGC TGTCGCTGTC 
GTGGTGATTT TGTGTCTTTC GTTGGGACGC TGGCAGTGGA GTCGTCATGT CAATAAGGAC
GCACGCATTG ACACAATTGC GGTGAACTAC TCAGCTGATC CGGTTGCTTT GAGTGAAGTG
GTTCCCTCCC CTAGCGACGC GATCTCCGAC TCCCAGGTGT GGACACCAGT ATCTGTGCGT
GGTACCTACG TACCACAGGC AACAGCGTTA TTGCGAAACC GCCCTATCGC TTCAACACCT
TCCGTGCACG TGTTAGTTCC GTTGGAAACG GAAGACGGTG CTGTCCTTCT TGTCAACCGT
GGTTGGGTTC CCTATGACGT TGACGTCACC CGCCCATCGA CGATCCCAGC TCCTCCCACA
GGTCTTGTGA CAGTGACCGT GCATCTTCGC CACAGTGAGG CACGCGTGGG GCGTGACGCA
CCTGATGGCC AAGTGCAGTC CATTACGGTG ACCGATGCGC TGGTTGCGGG GGCCACGTAT
GGCGGGTTGG AGCAGTGGCC CACGATGCCG GTGTACGAAC ATGTCTATGG ATCACTGATC
GAAGAAGACC CTGCCCCAAC CACCGCAATG CGGGCATTGC CCGAACCTGA CACGGACCCC
GGGTCACATT TGTCCTACGC ACTGCAGTGG TGGGTCTTTG CTATTGGTGC CGGCGCTGGT
TTCTTTGTGC TCGTCGTGCG GGAACACCGT TCACGCCGTG CACCAGTATC GTCAGAATAT
AACCCTTTTG CCGCATTGAA CGCCCAAGAG GGGACCTCCA GGACTGGCAA GCAACACGGT
GCGGGGCAAC GAAAGACGCG ACACATAAAG GACGTCGATG CGGACTACGA GGATTCTTTG
TTTGTTGATT GA
 
Protein sequence
MRSQPRSFLQ WLGIALAVAV VVILCLSLGR WQWSRHVNKD ARIDTIAVNY SADPVALSEV 
VPSPSDAISD SQVWTPVSVR GTYVPQATAL LRNRPIASTP SVHVLVPLET EDGAVLLVNR
GWVPYDVDVT RPSTIPAPPT GLVTVTVHLR HSEARVGRDA PDGQVQSITV TDALVAGATY
GGLEQWPTMP VYEHVYGSLI EEDPAPTTAM RALPEPDTDP GSHLSYALQW WVFAIGAGAG
FFVLVVREHR SRRAPVSSEY NPFAALNAQE GTSRTGKQHG AGQRKTRHIK DVDADYEDSL
FVD