Gene Jden_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1158 
Symbol 
ID8380335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1236138 
End bp1236854 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content57% 
IMG OID645003903 
ProductABC transporter related 
Protein accessionYP_003161117 
Protein GI256832390 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA TTTCTTTCAC TGATGTCAGT GTGGAGGCGC AAGGACGGAC ACTTCTTGCG 
CCCACCACGC TGAGTATCAC AGAACAACGT GTGGCCGTTG TTGGAGCTAA TGGGAGCGGA
AAGTCAACGT TCTTGCGGCT TGTCAACGGG CTCGTTGGAC CCACTTATGG CGCGGTCACA
GTTGATGGTG ATGACACCAT CGATCACGCC AGCAAGGTGC GGGCACAGGT GGCGTTCACG
TTCCCTGACC CGCACACACA AATTCTTGCA CCCACTGTGG GCGAAGACCT TGAGTTGTCA
TTGCGGATCG CGCGCCGCCG CAAGCGGCAC GATGATGTGT CATCGCAGGT TCCAGCCCAC
GCACAGACAC TTCTTGACCA GTGGGGTCTT GGATTGAGTC CGCATCAAGC TGTTGCGTCA
TTGTCTAGTG GGCAAGCACA ACTTGTCGCT CTCATGTCAG TGCTCGCTAC TGGTCCGCGA
GTGGTGGTGT GTGATGAGCC AACCACCCGA CTGGATGCCC GGTGGCGTCG ACGCGTCATC
GACCTTCTCG CCACGGTGGA TCAACAGGTG ATCTTCGCAA CCCATGACCT TGACCATGCA
CGGAGCACTG ATCGTGTCAT CGTGATCGAT CATGGTCATG TCATTGCAGA CGGCTCACCC
GATGAAGCAC TGGCCGCATA TGACCTGGTG CTCTCGCAAC CATGGCCTGA TCAATGA
 
Protein sequence
MATISFTDVS VEAQGRTLLA PTTLSITEQR VAVVGANGSG KSTFLRLVNG LVGPTYGAVT 
VDGDDTIDHA SKVRAQVAFT FPDPHTQILA PTVGEDLELS LRIARRRKRH DDVSSQVPAH
AQTLLDQWGL GLSPHQAVAS LSSGQAQLVA LMSVLATGPR VVVCDEPTTR LDARWRRRVI
DLLATVDQQV IFATHDLDHA RSTDRVIVID HGHVIADGSP DEALAAYDLV LSQPWPDQ