Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1158 |
Symbol | |
ID | 8380335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1236138 |
End bp | 1236854 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003903 |
Product | ABC transporter related |
Protein accession | YP_003161117 |
Protein GI | 256832390 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCA TTTCTTTCAC TGATGTCAGT GTGGAGGCGC AAGGACGGAC ACTTCTTGCG CCCACCACGC TGAGTATCAC AGAACAACGT GTGGCCGTTG TTGGAGCTAA TGGGAGCGGA AAGTCAACGT TCTTGCGGCT TGTCAACGGG CTCGTTGGAC CCACTTATGG CGCGGTCACA GTTGATGGTG ATGACACCAT CGATCACGCC AGCAAGGTGC GGGCACAGGT GGCGTTCACG TTCCCTGACC CGCACACACA AATTCTTGCA CCCACTGTGG GCGAAGACCT TGAGTTGTCA TTGCGGATCG CGCGCCGCCG CAAGCGGCAC GATGATGTGT CATCGCAGGT TCCAGCCCAC GCACAGACAC TTCTTGACCA GTGGGGTCTT GGATTGAGTC CGCATCAAGC TGTTGCGTCA TTGTCTAGTG GGCAAGCACA ACTTGTCGCT CTCATGTCAG TGCTCGCTAC TGGTCCGCGA GTGGTGGTGT GTGATGAGCC AACCACCCGA CTGGATGCCC GGTGGCGTCG ACGCGTCATC GACCTTCTCG CCACGGTGGA TCAACAGGTG ATCTTCGCAA CCCATGACCT TGACCATGCA CGGAGCACTG ATCGTGTCAT CGTGATCGAT CATGGTCATG TCATTGCAGA CGGCTCACCC GATGAAGCAC TGGCCGCATA TGACCTGGTG CTCTCGCAAC CATGGCCTGA TCAATGA
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Protein sequence | MATISFTDVS VEAQGRTLLA PTTLSITEQR VAVVGANGSG KSTFLRLVNG LVGPTYGAVT VDGDDTIDHA SKVRAQVAFT FPDPHTQILA PTVGEDLELS LRIARRRKRH DDVSSQVPAH AQTLLDQWGL GLSPHQAVAS LSSGQAQLVA LMSVLATGPR VVVCDEPTTR LDARWRRRVI DLLATVDQQV IFATHDLDHA RSTDRVIVID HGHVIADGSP DEALAAYDLV LSQPWPDQ
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