Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1152 |
Symbol | |
ID | 8380329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1231150 |
End bp | 1232595 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645003897 |
Product | fumarate lyase |
Protein accession | YP_003161111 |
Protein GI | 256832384 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.265028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGCGA CGCGCATCGA GAAGGATCTC ATCGGAACTG AACACATCCC CAGCGATGTG TATTGGGGGA TCCAAACGCT GCGTGCCGTG ACGAACTTCC CGATCACCGG GATCCCGATT TCCAGCCACC CCAACCTTAT TCGTGCGCTC GCTGCCGTGA AGATGGCGTG TGCTCACACG AATGCTCACT TAGGCATCTT GCCTAACGAG GTGGCTCAAG CCATCACTGA GGCATGTGAG ACAGTGATGG CGGGTCACCA CCACGACCAG TTTGTTGTTG ATGTCATTCA AGGTGGGGCA GGGACATCAA CCAATATGAA CGCCAACGAA GTCATCGCGA ATATTGCGTT GGAACGGTTG GGGGAACCAC GTGGAACCTA TGGTCGCGTG CACCCCAACG ACCACGTAAA CCTGTCACAG TCAACAAACG ACGCATACCC CACATCCTTG AAAGTGGCGT TGCTGTATTC GTTACGAGAA CTGCAAGAAT CGATGCACCA CTTGGAAGAG TCGTTTCGCT CCAAGGCAGA TGAGTTTCAC GACGTGCTCA AAATGGGGCG CACTCAACTT CAAGACGCGG TCCCCATGAC GCTCGGGCAA GAATTTGGCG CCTTTGCCAT CATGCTTGGC GAAGACCGGG CGCGACTTGG TGAGGCAGCA GAACTTCTCA CAGAAATTAA CCTCGGCGCC ACAGCCATTG GAACAGGGAT CAATGCGCCA GAAGGCTACG CAGAACTTGT AGCACGACAC CTCAGCGACA TCACAGGGTT TCCCACCACC ACAGCCGAAG ACCTCGTGGA AGCAACACAA GACGTTGGGT CCTTTGTGCA GGTATCAGGA ACCTTGAAGA GGGTTGCGGT GAAACTCTCC AAGATCTGCA ACGATCTGAG GTTACTGTCA TCAGGGCCCC GGGCAGGACT GGGGGAAATC CACCTGCCAC CTGTTCAAGC AGGTTCGTCA ATCATGCCCG GCAAAGTGAA TCCGGTGATC CCCGAAGTGG TCAACCAAGT TGCCTATGAA GTTGTCGGAA ATGACGTCGC CATATCGATC GCTGCAGAAG CAGGACAGTT GCAACTCAAC GCGTTTGAAC CGTTGATCTT CCACAAACTG GACTCTGGGG TGCGGCATTT GTCCCAAGCA TGTCGAACCC TCGCAGACCG GTGCGTTTCC GGGATCACCA CTGACCGCGA CGCCCTGCAA CGCACTGTCG AGCACTCTAT TGGCCTGGCC ACTGCCCTTA ACCCCCATCT TGGTTACGCC ACAGCAACCT CAGTTGCAGC CGAAGCACTC GCTAGCGGAC GCGGTGTCGC TGACATTGTC GTGGAGCGCC AACTCATGAC ACCAGAGGAG CTTGCCCTGG TTCTGAGCCC AGAACGACTA GCGAACCTCC GGCCCAAGAT GGTTATTCCT GCGCAAGAGT CGCCGGAAAC CCACCTGTCG CGATAG
|
Protein sequence | MTATRIEKDL IGTEHIPSDV YWGIQTLRAV TNFPITGIPI SSHPNLIRAL AAVKMACAHT NAHLGILPNE VAQAITEACE TVMAGHHHDQ FVVDVIQGGA GTSTNMNANE VIANIALERL GEPRGTYGRV HPNDHVNLSQ STNDAYPTSL KVALLYSLRE LQESMHHLEE SFRSKADEFH DVLKMGRTQL QDAVPMTLGQ EFGAFAIMLG EDRARLGEAA ELLTEINLGA TAIGTGINAP EGYAELVARH LSDITGFPTT TAEDLVEATQ DVGSFVQVSG TLKRVAVKLS KICNDLRLLS SGPRAGLGEI HLPPVQAGSS IMPGKVNPVI PEVVNQVAYE VVGNDVAISI AAEAGQLQLN AFEPLIFHKL DSGVRHLSQA CRTLADRCVS GITTDRDALQ RTVEHSIGLA TALNPHLGYA TATSVAAEAL ASGRGVADIV VERQLMTPEE LALVLSPERL ANLRPKMVIP AQESPETHLS R
|
| |