| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1120 |
|---|
| Symbol | |
|---|
| ID | 8380297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1191452 |
|---|
| End bp | 1192720 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645003861 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_003161079 |
|---|
| Protein GI | 256832352 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.523677 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAAACG TTCTTGATGA ACTGCAGTGG CGTGGTTTGG TATCGCAAAC CACCGACATT
GATGCGCTGA GAGCAGCGTT CGAGAACGGG CCAGTTACCT ACTATTGCGG GTTTGACCCC
ACTGCGCCCT CGCTGCACCA CGGTCACCTG GTGCAATTGG TGGTGTTGAA GCATTTGCAG
CGTGCAGGTC ACCGACCGAT CGCGCTGGTT GGAGGGGCTA CCGGGCTCAT TGGTGACCCG
CGCATGTCTG GTGAGCGTGT TTTGAACTCA AAAGAGGTGG TGGCTGGATG GGTGGAACGT
TTACGTTCCC AAATTGAGCG CTTCCTCGAT TTCGAGGGGG AGAACGCCGC GATGATGGTC
AATAACCTCG ATTGGCACGG GCAACTCTCA GCGTTGGACT TTCTGCGAGA TGTAGGAAAG
CACTACCGGC TCGGCACAAT GTTGGCGAAG GACACGGTGG CGCGACGGTT GGCTTCCGAT
GAAGGTATTT CTTTCACTGA GTTCAGCTAC CAGATTTTGC AGGGGATGGA TTTCTTGGAG
CTCAACCGCC GATACGGATG TACGTTGCAA ACAGGTGGCA ACGATCAGTG GGGGAACCTC
CTATCTGGGG TGGAACTTAT CCGTAAGTCG GACCGGGTAG CGGTCCATGC GTTGACAACA
CCGCTGATCA CCAAGGCGGA CGGAACGAAG TTTGGGAAGT CGGAAGGGGG AGCCGTGTGG
CTTGACCCGG CGATGATGTC CCCGTACGCC TTCTACCAGT TTTGGGTGAA CTCTGATGAC
CGGGACGTGA TTGGGTGGTT GAAAACCTTT ACTTTCCGTA GTCGTCAGGA CATTGAGGCA
CTTGAGCAGT CGTTGGAGGA GCGTCCTCAG GCTCGTGAAG CGCAGAAAGC GTTGGCTTTT
GATGTGACTG CAATGGTTCA TGGTGAGCGG GCTGCGCAGC AAGCGATCGC GGCCTCTGCC
GCGCTGTTTG GTCGGGGAGC TTTTGAGGAT CTGGCTGAGT CGACGCTTGT GGCTGTGACA
GCTGAGCTTG ATATTGCCAC CATTTCTGTT GGATCACCTG TTGTTGATGC TCTGGTTGAG
GCTGGGTTAG TGCAGTCTAA GGCGGCTGCT CGTCGGGCTA TCACAGAGGG CGGTGCGTCT
ATTAACAACG TCCGGGTGTC CGATGTTGAG GCTGTCTTCA CCGAAGACCA GTTGCTTCAT
GGCGCGTGGG TGATCCTCCG TCGGGGTAAG AAAGCCGTTG CCGCGGGACG AGTTGCAACC
CAGGAGTAA
|
|---|
| Protein sequence | MTNVLDELQW RGLVSQTTDI DALRAAFENG PVTYYCGFDP TAPSLHHGHL VQLVVLKHLQ
RAGHRPIALV GGATGLIGDP RMSGERVLNS KEVVAGWVER LRSQIERFLD FEGENAAMMV
NNLDWHGQLS ALDFLRDVGK HYRLGTMLAK DTVARRLASD EGISFTEFSY QILQGMDFLE
LNRRYGCTLQ TGGNDQWGNL LSGVELIRKS DRVAVHALTT PLITKADGTK FGKSEGGAVW
LDPAMMSPYA FYQFWVNSDD RDVIGWLKTF TFRSRQDIEA LEQSLEERPQ AREAQKALAF
DVTAMVHGER AAQQAIAASA ALFGRGAFED LAESTLVAVT AELDIATISV GSPVVDALVE
AGLVQSKAAA RRAITEGGAS INNVRVSDVE AVFTEDQLLH GAWVILRRGK KAVAAGRVAT
QE
|
|---|
| |