| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1109 |
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| Symbol | |
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| ID | 8380286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1179064 |
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| End bp | 1181628 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003850 |
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| Product | phenylalanyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_003161068 |
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| Protein GI | 256832341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.387585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGA TTTCGTTGCC GTGGTTGGCT GACCACGTGG AGGTTCCCCA AGGACTGACT
GCGTCGCAGT TGGCTGCAGA CCTTGTGCGG GTGGGTTTGG AAGAAGAAGC AATTCACTCC
TCAGGTGTCA CAGGACCAGT GGTTGTGGGT CGGGTTGTCT CCTTAGAAGC CGAGCCGCAG
AAAAATGGAA AGACCATTAA CTGGTGTCAG GTGGATGTGG GGGAGCACGG TGTTCCTGGA
GCGGATGGTT CCTTTGCTCC ACGTGGCATT GTGTGTGGTG CGCACAACTT TGGGGTCGGT
GACTTCGTGG TTGTTGCGCT TCCAGGTGCA GTGCTGCCGG GTCCCTTCGC TATTTCGTCC
CGCAAGACGT ACGGGCACAT CTCCGATGGA ATGATTTGTT CCCAACGCGA GTTGGGCTTG
GGCGATGATC ACGCAGGCAT CATTGTTCTT ACTACTCTCG GTTTTGACGA GCGAGACCTC
TGTGTTGGTG ACGATGCGCT CGCTGTGCTC GGGCTGGATG ATGAGATCCT TGAGATCAAC
GTGACTCCTG ACCGTGGTTA CTGCTTTTCG ATGCGTGGGA TTGCTCGCGA GTATGCTCAT
GCAACTCGTA AGGTTTTTGA GGATCGAGTT GTTGCGGGGC GCACACCGCC AGCGACGGCT
GATGGCTTTT CTGTTGTGGT ACGTGACGAT GCGCCCATTC ATGGGGTGGT CGGGTGTGAT
CGTTTTGTGA CGCGTTTGGT GCGGGGGATC GACCCGGCAG CAGCGACTCC GCGGTGGATG
GTTCGCCGTT TGGAGCAGGC GGGGATGCGT TCTATTTCGT TGACAGTGGA TGTCACGAAC
TATGTCATGT TGGACATGGG GCAGCCGTTG CATGCTTATG ATCTCTCCAC TGTGGTGGAG
CCGATTGTTG TTCGTCGTGC AATCTCAGGC GAGTTATTGA CGACATTGGA TGATCAGGAA
CGGGTTCTTC ACGCCGAAGA TCTTGTCATT GCTGATTCCT CGGGTGGTGA AGGTGCACGA
GTTCTTGGTC TTGCTGGGGT CATGGGTGGT GCGGCCACTG AAGTCTCGGC TCGCACCACA
GATGTCCTCA TTGAGGCCGC ACATTTTGAT GCGGTGTCAG TGGCACGGTC AGCGCGTCGG
CATAAACTTC CTTCAGAGGC ATCACGGCGT TTTGAGCGCG GTGTTGATCC TCTCGTGGCT
CCTTTTGCCG CTCAGCGTGT TGTGGAGTTA CTTGTCGAGT TTGGGGGTGG CGTTGCTGAC
CCGCGGGTCG GGGACGTCAA TGAAGTGCCA GCACGTAGCT CGATTAAGTT CTCTTTGCGT
GATCCAGAGC GTTTGTGTGG CGTGCCGTAC AGCGATGACA GTGTTGTGCG TGCGTTGCAG
GAAATTGGCT GTGTGGTCAC CGCTGTTCCG GATTCGTCGA TCGTTGATGT TGTGCCACCG
TCGTGGCGGC CTGACTTAAC TGGTGCTGCG GAACTTGTCG AAGAGGTTGC TCGGTTGGTG
GGCTACGACA TGATCGTTCC TCGGTTACCG CAGGCTCCGG CTGGACGTGG TTTGACTGCT
GCTCAGAAGG CGCGCCGCCG GGTGGCGGCC GCTCTTGCTG AGTGGGGGTG CGTGGAGACG
TTGTCGTATC CGTTTACTTC TGATGAAGCT CGTGATGCAT TGATGATCGA TGCGCAGGAT
GTGCGCCGTC AGTCGGTGCG CTTGCGTAAC CCGTTGCAGG GGGATCGTTC GTTGATGCGG
ACGTCTTTGC TGGAGACTTT GGTGGACACT GCTCGTCGGA ATGTGTCTCG GGGTATTGCG
TCCTTTGCGA TCAGCGAGAT CGGTATGGTG ACACGCCCAG GGGATTGTGC AATGAGCGCA
CCAGCATTGC CACCGGCCCG TCAGCCGTCA GCAGATGAGT TGGAGCAGTT GTTGGCGAGT
GTGCCTTCCC AGCCACGGCA TGTTGCTGGT GTGCTGTGTG GGTCACGTAG TGAGGCGAGT
TGGTGGGGTG GCGCTGAGGC GTGGCAGTGG TCTGATGCTC TTGATGCTGC GTTGCTTGTT
GCTGAGCGTG TTGGCGTGTC ATTGCGGGTG GAGTCAGAAC AGAACTATGC TCCCTTTCAC
CCTGGGCGCT GTGCGCGTCT AGTTACTGAG GATTTAGTGA CTGTGGGCTA TGCTGGCGAG
CTTCACCCCA AGGTGTGTGA ACAGGTGGGG TTGCCGGCCC GTTCGTGTGC GTTTGAGGTT
GATCTTGATG CGTTGATCTT CGCGTGTGAC AACGTTCCAG TGCAGGCTGA TCCTGTGTCG
ACCTTCCCAG TGGCGAAGGA AGATTTTGCG TTTGTGGTAG CTGAAGACAT CACAGCCGCT
TCTGTGCGTC AAGCTATCCT CGACGGCGGC GGTGCGGATG TGGAGTCTGT GCAGTTGTTT
GATGTGTTCC GTGGCGAGCA GGTGGGGGCG GGCCGTAAGT CGCTTGCGTT TGCTGTTCGG
TTGCGTGCGC ACGACCGTAC TCTTGATGCG CAGGGTGTGT CTGAGATCCG TGAGCGGATT
ATTAAGGCCG CGGCTTTCAG TGTTGACGCT GAGTTGCGCG GCTAG
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| Protein sequence | MPRISLPWLA DHVEVPQGLT ASQLAADLVR VGLEEEAIHS SGVTGPVVVG RVVSLEAEPQ
KNGKTINWCQ VDVGEHGVPG ADGSFAPRGI VCGAHNFGVG DFVVVALPGA VLPGPFAISS
RKTYGHISDG MICSQRELGL GDDHAGIIVL TTLGFDERDL CVGDDALAVL GLDDEILEIN
VTPDRGYCFS MRGIAREYAH ATRKVFEDRV VAGRTPPATA DGFSVVVRDD APIHGVVGCD
RFVTRLVRGI DPAAATPRWM VRRLEQAGMR SISLTVDVTN YVMLDMGQPL HAYDLSTVVE
PIVVRRAISG ELLTTLDDQE RVLHAEDLVI ADSSGGEGAR VLGLAGVMGG AATEVSARTT
DVLIEAAHFD AVSVARSARR HKLPSEASRR FERGVDPLVA PFAAQRVVEL LVEFGGGVAD
PRVGDVNEVP ARSSIKFSLR DPERLCGVPY SDDSVVRALQ EIGCVVTAVP DSSIVDVVPP
SWRPDLTGAA ELVEEVARLV GYDMIVPRLP QAPAGRGLTA AQKARRRVAA ALAEWGCVET
LSYPFTSDEA RDALMIDAQD VRRQSVRLRN PLQGDRSLMR TSLLETLVDT ARRNVSRGIA
SFAISEIGMV TRPGDCAMSA PALPPARQPS ADELEQLLAS VPSQPRHVAG VLCGSRSEAS
WWGGAEAWQW SDALDAALLV AERVGVSLRV ESEQNYAPFH PGRCARLVTE DLVTVGYAGE
LHPKVCEQVG LPARSCAFEV DLDALIFACD NVPVQADPVS TFPVAKEDFA FVVAEDITAA
SVRQAILDGG GADVESVQLF DVFRGEQVGA GRKSLAFAVR LRAHDRTLDA QGVSEIRERI
IKAAAFSVDA ELRG
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