| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1106 |
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| Symbol | |
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| ID | 8380283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1175772 |
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| End bp | 1176599 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003847 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_003161065 |
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| Protein GI | 256832338 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0367353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACC TGACGAACCC GCGAAGTGAC CGGGTCAAAA TGGTTCGACG CTTGTCTGGG
CGTTCGTCGC GTACCAAACA TGGCCAATTC CTTGTTGAAG GGCCTCAAAG CGTCCGTGAA
CTCGTTGCCT GCCGGGCTGA ACTGGTCCGA GACCTCTATG TCAGTTCGGA CCGTGTGGAC
CGCTACCGAG ACATTTACGA CGAGGCGCAC AGACAATCTC TTTACCTACA CACCACCACG
CCAGAGGTCC TGTCAGCCAT GAGCGAGGAC GCACAGGGCA TTGTCGCGGT TGCGCGTACT
TTAGACACGC GCCTCTCGTC ACTTGGCCCC GTCCTGAGCA AAGCCTGTCT TGTCGCAGTT
CTCACTGACG TACGGGACCC CGGTAACGCG GGAACCGTGA TCCGGGCAGC TGATGCAGCT
GGAGCTGATG TGGTGATCCT TGCAGGTGAC AGTGTGGACT TAATGAACCC CAAGGTTGTG
CGATCCAGTG CTGGGTCACT GTTTCACATG CCGGTGATCA CCAATGCATC ATTGGTTGAT
GTGCACGGTG CACTCAAGAT GGCCGGAATC CCGCTTTTCG GGACCACGCC ATATGCTGAC
CTCACACTCG ATGACCTCGT GGAGCCACAA GGTCCTACCA GTGTGGGAGC ACCACATGCG
TGGGTGTTTG GAAACGAAGC ACAAGGACTC AGCGTTGAGG ACCAGTCCAT GTGCGATTCG
CTGGTACGGA TTCCCATGTA CGGACGTGCG GAATCGTTGA ACCTGGCAAT GGCTGCCACT
ATTTGCTTGT ACACATCCGC TCGCGCATTG CGCACGACGA CAAGGTGA
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| Protein sequence | MPDLTNPRSD RVKMVRRLSG RSSRTKHGQF LVEGPQSVRE LVACRAELVR DLYVSSDRVD
RYRDIYDEAH RQSLYLHTTT PEVLSAMSED AQGIVAVART LDTRLSSLGP VLSKACLVAV
LTDVRDPGNA GTVIRAADAA GADVVILAGD SVDLMNPKVV RSSAGSLFHM PVITNASLVD
VHGALKMAGI PLFGTTPYAD LTLDDLVEPQ GPTSVGAPHA WVFGNEAQGL SVEDQSMCDS
LVRIPMYGRA ESLNLAMAAT ICLYTSARAL RTTTR
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