| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1105 |
|---|
| Symbol | |
|---|
| ID | 8380282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1175338 |
|---|
| End bp | 1175724 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645003846 |
|---|
| Product | ribosomal protein L20 |
|---|
| Protein accession | YP_003161064 |
|---|
| Protein GI | 256832337 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0771886 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.917158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCACGCG TGAAGCGGGC GGTTAACGCC CACAAAAAGC GTCGGACAGT ACTCGAGCGC
GCAAGCGGTT ACCGTGGGCA GCGCTCACGC CTCTACCGCA AGGCAAAAGA GCAAGTTACC
CACTCACTGG TCTACAACTA CCGCGACCGT AAGCGTCGTA AAGGGGACTT CCGTCGCCTG
TGGATCCAGC GCATCAATGC TGCAGCCCGC GCCCAGGGTA TGACCTATAA CCGTTTTATC
CAAGGGCTCA AGGCTGCAGG TGTTGAGGTT GACCGTCGAG TTCTTGCCGA ACTTGCCGTC
AGTGACATCA ACGCGTTCAA CGCTCTTGTC ACCGTCGCAA AGGCAGCCCT GCCCGAGGAC
GTCAACGCTC CTCGCCAGGC TGCGTAA
|
|---|
| Protein sequence | MARVKRAVNA HKKRRTVLER ASGYRGQRSR LYRKAKEQVT HSLVYNYRDR KRRKGDFRRL
WIQRINAAAR AQGMTYNRFI QGLKAAGVEV DRRVLAELAV SDINAFNALV TVAKAALPED
VNAPRQAA
|
|---|
| |