Gene Jden_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1102 
Symbol 
ID8380279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1173505 
End bp1173927 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID645003843 
Productferric uptake regulator, Fur family 
Protein accessionYP_003161061 
Protein GI256832334 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.387055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.912899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGT CATTTGAGGA ACTCCTCAGG TCTGCAGGCC TACGCGTCAC CGCGACACGC 
CTCGCCGTCC TCGACGCCGT CTCCCATCAC CCCCACGCAG ACTCTGACAC CGTCTTAACC
GCAGTCCGCC AGGCCCTGGG CACAGCATCG GTGCAGACCA TCTACGACGC CCTCAATACC
TTTGCCGCCC ATGGTTTGAT GAACCGCATC GAACCAGCCG GCCACCCCGC ACGCTTCGAA
CTACGGGTAG GAGACAACCA CCACCACATG GTGTGCCGAG CCTGCGGCGA TGTCCAAGAC
ATCGACTGCA CCATCGGACA AGCCCCCTGC CTCATCCCCC ACACCAACCA CGGCTACACC
GTGGACGAAG CGGAAGTGAC GTTCTGGGGG CGATGCCCCC AGTGCCAAAC ACGCACAACG
TGA
 
Protein sequence
MDTSFEELLR SAGLRVTATR LAVLDAVSHH PHADSDTVLT AVRQALGTAS VQTIYDALNT 
FAAHGLMNRI EPAGHPARFE LRVGDNHHHM VCRACGDVQD IDCTIGQAPC LIPHTNHGYT
VDEAEVTFWG RCPQCQTRTT