Gene Jden_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1098 
Symbol 
ID8380275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1169992 
End bp1170729 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content54% 
IMG OID645003839 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003161057 
Protein GI256832330 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.21329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.956497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCACA CCCGCAAGGC TCATTTTGGT GTGACCAGCA CACTCGCTCT TATGCTCGTG 
ACGGGGTGCG GGGCACTCCC ACCAGAACCA CCAGAAGTCC CTGACACCTA TGTCCCCAAC
ATGACCTTCA TTCCAGAGTC AGAAGGTGGG ATCACGACAT ATGGTTTCTC TGAAGCACAA
CGCATGACCG TGCGGGTGCG AAATGTCGGC TGCAGCGCTG TTACTCGTGG TACTGGCTTT
GCTATCGACC AGCAGACTCT TGTCACCAAT AAACACGTTG TTGAGGGAAC CAACGAGCTG
CAACTTTCTA CCTCTGACGG CCGTGACATC GAGGTGACTG GTGCACAATC TGCAAACCTC
GCAGACTTGG CGATCGTCCG TACGACGCAA CAACTTGACG CATCACCAGT ACTTGCGTCA
GCGGACCCCC AAATTGGTGA CGTGGTATCC ATCATCGGTT ACCCCAATGG GGGTCAACTC
ACTCTCACTT CAGGCACAGT CCTTGATTAC ACGGACGACC CACTCAATGA GAACCTTGGT
CAAGTGGCGG TGGCTGATGC TGAAGTCGAG CCCGGTAGCT CAGGTTCAGC AGTCCTCAAT
GAGTCGGGTC AAGTCGTGGG TGTTGTGTAT GCAAAATCGA GTTCAGGAAA GACGTTCTTC
ATCCCGGTAT CGACGTTGAC GACGCTGCTT GACACTCCTG CAGACTTCAC CCAAGCTGAG
GAACCAACCT GTGACTAA
 
Protein sequence
MRHTRKAHFG VTSTLALMLV TGCGALPPEP PEVPDTYVPN MTFIPESEGG ITTYGFSEAQ 
RMTVRVRNVG CSAVTRGTGF AIDQQTLVTN KHVVEGTNEL QLSTSDGRDI EVTGAQSANL
ADLAIVRTTQ QLDASPVLAS ADPQIGDVVS IIGYPNGGQL TLTSGTVLDY TDDPLNENLG
QVAVADAEVE PGSSGSAVLN ESGQVVGVVY AKSSSGKTFF IPVSTLTTLL DTPADFTQAE
EPTCD