| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1091 |
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| Symbol | |
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| ID | 8380268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1162967 |
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| End bp | 1165333 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003832 |
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| Product | ATP-dependent DNA helicase, RecQ family |
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| Protein accession | YP_003161050 |
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| Protein GI | 256832323 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.305899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATA TGGACAAGCT TGCTCGGTTA GCGCAACAGC GGCGCACCCC GAAACCACAC
GGTGATGGGA TGGCCTGGGG TGTGTCTTCC ACTGATGCAC GCGACGGCAT GGCAGCCCAG
GATTCATCGC ACAGCAGTGC TCCTGCAGCG CTTCCCAGTG TCACAGCTGA TGTGGGTGAT
CACGATGTTG TTGCTCACGC TACTAACAGC GGTATGCCAG TTACAGCTGA GGACCTGCAG
GAGCACGCCA CGTCTCTGCT TCGGGCACTC ACAGGACACG AGGATGCACG CTTTCGCGAC
GATCAATGGC ACGCTATTGA GCGGCTAGTT GTCCACTCAG AGCGTGTTCT TGTTGTCCAA
CGAACTGGCT GGGGCAAGTC AGCGGTCTAT TTCGTGGCAA CTGCACTATT GCGCGAGCAA
GGGCAGGGAC CAACTGTCAT TATTTCTCCT CTTCTTGCAT TGATGCGCGA TCAGATCCGT
GCTGCAAGCC GTGCTGGTCT GCATGCCGTG ACAGTGAACT CCTCCAACGT TCACGAGTGG
GACGACATCC AGGAACAGAT CGCCTCAGGA GGCGTTGATC TGCTCCTCAT CTCACCTGAA
CGACTGAATA ATCCTCAGTT TGTTCATGAC GTCCTCCCCT CGTTGGCACA GTCAGCTGGT
CTTGTTGTCG TCGACGAAGC GCATTGCGTG TCAGATTGGG GCCACGATTT CCGTCCCGAT
TACCGTCGCA TCCGCGATGT TTTGGCTTCT CTGCCTCCTG GCTGCCCAGT CCTCGCGACG
ACTGCAACCG CTAACGAGCG AGTCACTGTG GATGTTGCCG CACAATTAGC GGAAGCATCG
GCCGCACCTG ACGGCAGTGA CGCCACATCT GTCACTGTCA TACGGGGCAA TCTCGAACGG
ACATCGCTGC ATTTAGCAGT CGTCACGTTA CCGACAGCGG TTGACCGACT CGCGTGGGTA
ATCGACGCAA TGAATAATTT TCGTGGCTCT GGCATCATTT ACACCCTCAC GGTCGCACAA
GCGGAGGAAG TAGCCCAAGC CCTGAGGTCT GCTGGCCATG ATGTGGCGAG TTACACCGGG
CAAACACCTG ACGAAGAACG TGTCGAACGG GAAGCAGCGC TTCGTGACAA CCGCATTAAA
GCGTTAGTTG CCACCTCCGC TCTAGGTATG GGATTTGATA AACCAGACTT GAGGTTTGTC
ATCCACTTTG GCAGCCCTGA CTCCCCAGTG TCCTATTACC AACAAGTCGG TCGGGCAGGG
CGTTCAGTTG ACGCAGCGAC CGCTGTCCTG CTTGCTGCAC CAGAAGACCG TAAAATCTGG
GAGTATTTTT CCTCGCTGTC TTTTCCTGAC CCCGACACAG TCCATACCGT CCTTGACCTT
CTCAACCAGG CAGATGCACA GGATTCCGCG TTGTCAGTTC CTGCCCTCGA AACACAAGTG
GAGGTGAAAC GAGCCCGGCT TGAACTGATG CTCAAAGTAC TCAGTGTCGA TGGTGCAGTC
CGCAAGGTCC GCGGCGGATG GCGGGGAACA GGGCAGCCGT GGCATTACGA TACCGCCCGA
TATCAACGAA TCGCACAGGC ACGCGCCCGG GAACAGCAAG ACATGATCAA CTACGTGACG
ACCACGCAGT GCCGATCAAC TTTCCTGCGG ATGCGACTCG ATGACCCCCA CATCACCGCA
GACACTCGAT GCGGCCGATG CGATAACTGC GGCGCACTAT CACTTCCTAC TCAACCCACG
CCAGGCGCTG TCGCACATTT GTCCGAACGC ACCGGCGATC AGGGGCTCCA GATTGAACCA
CGAAAAATGT GGCCAAGTGG TCTACGTGAC CACACACTTG CGCTTTCTGG CCGCATCCCG
GCTCATGAAC AAGCAGATGA AGGACGCGCC ATTGCGCGCA CCGACTCTGT TTTGTGGGCA
CGGGTTCTGC GTGAAGTTCT TGCTGACACT GACGGCGAAC TTCCCGTCCC GCTACGGCAC
GCAAGTGTTG AGGTACTGCA GCGCTGGGAC ATCAGCAAGC ACATCGACGG CGTTATTGCC
ATTAAATCAG CGACCCGGCC CCGTTTGACA CATCATCTGG CCACTGGCCT CGCTTCTTGG
TTGGGCGTAC CGCTCGTTGG CACCTTCGGG TATAAAACCC CTACGCCCAG CCGCCATGAT
GTCAACTCAG CAACACGACT CATCGCTGTG ACCGAACGCC TCGTGCCAGA ACTCAGTGAT
GGTGCACAGC GCGGCCTACC TGGAAAACAG GTGCTTCTCA TTGACGACTA CACCCAATCT
GGGTGGACAC TGACAGTTGC TGCACGCACA CTCAAACTAC TCGGTGCATC AACAGTGCAC
CCTTTTGTTC TCGCCCAGCA GGCTTAG
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| Protein sequence | MPDMDKLARL AQQRRTPKPH GDGMAWGVSS TDARDGMAAQ DSSHSSAPAA LPSVTADVGD
HDVVAHATNS GMPVTAEDLQ EHATSLLRAL TGHEDARFRD DQWHAIERLV VHSERVLVVQ
RTGWGKSAVY FVATALLREQ GQGPTVIISP LLALMRDQIR AASRAGLHAV TVNSSNVHEW
DDIQEQIASG GVDLLLISPE RLNNPQFVHD VLPSLAQSAG LVVVDEAHCV SDWGHDFRPD
YRRIRDVLAS LPPGCPVLAT TATANERVTV DVAAQLAEAS AAPDGSDATS VTVIRGNLER
TSLHLAVVTL PTAVDRLAWV IDAMNNFRGS GIIYTLTVAQ AEEVAQALRS AGHDVASYTG
QTPDEERVER EAALRDNRIK ALVATSALGM GFDKPDLRFV IHFGSPDSPV SYYQQVGRAG
RSVDAATAVL LAAPEDRKIW EYFSSLSFPD PDTVHTVLDL LNQADAQDSA LSVPALETQV
EVKRARLELM LKVLSVDGAV RKVRGGWRGT GQPWHYDTAR YQRIAQARAR EQQDMINYVT
TTQCRSTFLR MRLDDPHITA DTRCGRCDNC GALSLPTQPT PGAVAHLSER TGDQGLQIEP
RKMWPSGLRD HTLALSGRIP AHEQADEGRA IARTDSVLWA RVLREVLADT DGELPVPLRH
ASVEVLQRWD ISKHIDGVIA IKSATRPRLT HHLATGLASW LGVPLVGTFG YKTPTPSRHD
VNSATRLIAV TERLVPELSD GAQRGLPGKQ VLLIDDYTQS GWTLTVAART LKLLGASTVH
PFVLAQQA
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