Gene Jden_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1090 
Symbol 
ID8380267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1162147 
End bp1162914 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID645003831 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003161049 
Protein GI256832322 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.141737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCACC AAGCAGGCAC GAGGGTCACA GCAACGCAGG TTGCTCGACA TGCTGGCGTG 
TCGGTGGCGA CGGTGTCGTT GGTCGTCAAC GGTAAACATC GTGGGCGTGT CTCTCCAGCA
AATGTGGACA AGGTTCGCCG ATCCATTGCG GAGCTAGGTT ATGTGGTGGA TCGTGTTGCG
AGTTCCTTGT CGAAAGGTTC TTCTGATCTG GTGATTCTTA TTGCACCCGA TATTTCGAAT
CCCTTTTTCG CGGGTGTGAT TGCCGGTATT AAACAGGTGT TGGGGGATCG GTACCAGTTA
TTGGTTTCTG TGACGGATGA CGGTAATTTG CCCCGGGCGC AGGAGATTCG GGCTTCGTTG
GAGTTTCGTC CTGCCGCTCT TTTGGTGTTT GCTCCTGCAC AATCGTTTGT CGATGAGGTG
CGTGGGGCAG CCCCGATGGT GCTCATTGAT GCTCCGGGCA TGGAACATAT TGGTCCAACA
ATCAACATTG ATATTCAGGC ATACGGCGTG ATTGGTGCGG CTCGCGCGCT GGGGTTACGT
ATCCCTGATG ATCTGTCAGT GGCGTCGTTT GACAACTTGT CGTACTCGGC GATTTCGTCA
CCCTCCCTCA CGTCTGTGGA GTTACCATCT GGGGAACTTG GACAGGCTGC TGCCCGGGTC
GCGTTATCGC TCATTCAGGG CGAGGCAGTC CCAGTTACCC ATGAAGTGTT TGCTGGACAA
CTGCATGTAC GCGAATCGAC CGCTGCGTAT CACGGCCAGG GTGCTTGA
 
Protein sequence
MRHQAGTRVT ATQVARHAGV SVATVSLVVN GKHRGRVSPA NVDKVRRSIA ELGYVVDRVA 
SSLSKGSSDL VILIAPDISN PFFAGVIAGI KQVLGDRYQL LVSVTDDGNL PRAQEIRASL
EFRPAALLVF APAQSFVDEV RGAAPMVLID APGMEHIGPT INIDIQAYGV IGAARALGLR
IPDDLSVASF DNLSYSAISS PSLTSVELPS GELGQAAARV ALSLIQGEAV PVTHEVFAGQ
LHVRESTAAY HGQGA