Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1090 |
Symbol | |
ID | 8380267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1162147 |
End bp | 1162914 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645003831 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003161049 |
Protein GI | 256832322 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.141737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCACC AAGCAGGCAC GAGGGTCACA GCAACGCAGG TTGCTCGACA TGCTGGCGTG TCGGTGGCGA CGGTGTCGTT GGTCGTCAAC GGTAAACATC GTGGGCGTGT CTCTCCAGCA AATGTGGACA AGGTTCGCCG ATCCATTGCG GAGCTAGGTT ATGTGGTGGA TCGTGTTGCG AGTTCCTTGT CGAAAGGTTC TTCTGATCTG GTGATTCTTA TTGCACCCGA TATTTCGAAT CCCTTTTTCG CGGGTGTGAT TGCCGGTATT AAACAGGTGT TGGGGGATCG GTACCAGTTA TTGGTTTCTG TGACGGATGA CGGTAATTTG CCCCGGGCGC AGGAGATTCG GGCTTCGTTG GAGTTTCGTC CTGCCGCTCT TTTGGTGTTT GCTCCTGCAC AATCGTTTGT CGATGAGGTG CGTGGGGCAG CCCCGATGGT GCTCATTGAT GCTCCGGGCA TGGAACATAT TGGTCCAACA ATCAACATTG ATATTCAGGC ATACGGCGTG ATTGGTGCGG CTCGCGCGCT GGGGTTACGT ATCCCTGATG ATCTGTCAGT GGCGTCGTTT GACAACTTGT CGTACTCGGC GATTTCGTCA CCCTCCCTCA CGTCTGTGGA GTTACCATCT GGGGAACTTG GACAGGCTGC TGCCCGGGTC GCGTTATCGC TCATTCAGGG CGAGGCAGTC CCAGTTACCC ATGAAGTGTT TGCTGGACAA CTGCATGTAC GCGAATCGAC CGCTGCGTAT CACGGCCAGG GTGCTTGA
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Protein sequence | MRHQAGTRVT ATQVARHAGV SVATVSLVVN GKHRGRVSPA NVDKVRRSIA ELGYVVDRVA SSLSKGSSDL VILIAPDISN PFFAGVIAGI KQVLGDRYQL LVSVTDDGNL PRAQEIRASL EFRPAALLVF APAQSFVDEV RGAAPMVLID APGMEHIGPT INIDIQAYGV IGAARALGLR IPDDLSVASF DNLSYSAISS PSLTSVELPS GELGQAAARV ALSLIQGEAV PVTHEVFAGQ LHVRESTAAY HGQGA
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