| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1084 |
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| Symbol | |
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| ID | 8380261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1154914 |
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| End bp | 1155855 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003825 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003161043 |
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| Protein GI | 256832316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGG ATCACCGTTC CTTTCCTGTT CCAGATGGGC TTGTTGGACA ACGTGTTGAC
GCGGCCTTAG CACGGATGTT GGGACTGTCA CGTAGTGCAA TTCTCGCGGC GTTCGACGCA
GGAGATGTTT ATGTTGACGG TCGCCCTGCA GCAAAGGGCG ACCGGATCGT ACAGGGGGCA
GTGATTGACG TTGTCCTTCC CGACCCACGG GAGGTCGATG CCACAGAGGA TGAGCCGCAG
CCGGTCCCCG GAATGCGCAT CGTTCACGAT GATGAACACA TTGTTGTGGT GGACAAACCA
GTAGGAGTTG CCGCCCACTC GGCGGTTGGC TGGTCTGGGC CGACAGTCGT TGGCGCGCTC
GCGGCCGCTG GCTACCGTAT TTCAACGTCC GGCGCAGCAG AACGGCAAGG TATTGTTCAC
CGCCTAGACG TTGGCACCTC AGGTCTTATG GTGGTGGCGA AGTCCGAGCT TGCGTACACT
CGGCTGAAAC GAGCTTTCCG AGAACGAACC GTTGACAAGG TGTATCACAC CGTTGTCCAA
GGTCACCCAG AACCGACAAA GGGTACGATA GACGCTCCGA TCGGACGGCA TCCGAAAGCG
GAGTTTAAGT TCGCTGTGAT GGCTGATGGT AAACGCTCAA TCACTCACTA CGAAGTGATG
GAAATGCTCC CATCCGCGTC ACTAGTAACT GTTCACTTGG AAACAGGTCG TACCCACCAA
ATACGAGTCC ATTTCTCGGC GATGCGACAC CCCTGTGTCG GTGACTCGAT GTATGGGGCC
GATCCGACAC TCGCTCGCCG CACCGGGCTT GACCGGCAGT GGCTGCATGC CGTTGAGCTG
TCCTTCGAGC ATCCGGCAAG TGGTGAACGG TTCACGGTGG CATCTGAGTA TCCACAGGAC
TTGCAGCAAG CGCTTGATGT GCTGCGCGGG GACTACGGTT AA
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| Protein sequence | MSRDHRSFPV PDGLVGQRVD AALARMLGLS RSAILAAFDA GDVYVDGRPA AKGDRIVQGA
VIDVVLPDPR EVDATEDEPQ PVPGMRIVHD DEHIVVVDKP VGVAAHSAVG WSGPTVVGAL
AAAGYRISTS GAAERQGIVH RLDVGTSGLM VVAKSELAYT RLKRAFRERT VDKVYHTVVQ
GHPEPTKGTI DAPIGRHPKA EFKFAVMADG KRSITHYEVM EMLPSASLVT VHLETGRTHQ
IRVHFSAMRH PCVGDSMYGA DPTLARRTGL DRQWLHAVEL SFEHPASGER FTVASEYPQD
LQQALDVLRG DYG
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