| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1072 |
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| Symbol | |
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| ID | 8380249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1143244 |
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| End bp | 1144752 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003813 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_003161031 |
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| Protein GI | 256832304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCGTC AGTTGAACCG TCATAGTGAA CTCGCGAAAT CTCTTGCTGA TAGTCACGTG
CTTGTTGCTG GGCTGGGAGT GTCAGGTCAG GCTGTTGTTG ACGTGCTCAC TGAGCTACCC
AATGGCCGAC ACCCAGCCTC CGTCAGTTCA CTTGACGCCC AGGCAGAGGG CGCTCACTAT
TCATCCTCTT CGCAGGTGCC GTGGGACAGC ATTGACCTTG TCATTGCGTC TCCCGGCTGG
CCACCACACC ACGAGGCGCT GACTGCCGCC GCTGACCACG CAGTGCCTGT GTGGAGTGAG
ATCGAGCTTG CGTGGCAACT GCGAGTGAAC AACGAACACA CAAACAAACC AGCACCGTGG
CTCGCTGTCA CTGGAACCAA TGGGAAAACC ACCACCGTTG AACTCTTAGC AACAATTCTT
CACGCTGACG GCCTTCGTGT GGCAACGGTT GGCAATGTGG GTGCACCTGT CATCCGGCAG
ATCCAGAACC CCACAATCGA TGTCTTTGTC CTTGAACTCT CCAGCTTCCA ACTCCACTTC
ACCTACTCGA TGGAACCGCT TGCCTCCGCG ATCCTCAACA TTGCTGAAGA CCACGTTGAT
TGGCACGGAT CATTTGACCA GTACGCTTCT GACAAAGCGC GGATCTTCAC TCACACCCAC
CGCGCCTGTG TATATAGCGA AGGTGATGAC CGTGTCGTTA GGTTGCTTCA CGAAGCTGAC
GTTCACCCTG GTGCTCGAGC AATCTCAGTG AGCGCTGAAA GCCCAACTCC TAGCTCGCTG
GGGATTGTGG ATGGTGTTCT GTGTGATCGA GCATTTACGG AGCCACTGAC CGGCCCTCAG
CGATACCGCC ATGCGGCGGA ACTTGCCCAA CTGTCAGACC TGGCGCACCT CGCTGGCCCA
GATGGTGTCG TCGGTTCGCA CACCATCACT AATACGCTGT TCGCTGCGGC TCTCGCCCGC
GCCTATGGGG TGGCCCCTCG TGCAGTCCGG GATGGGGTCA AGAGCTTCCA ACCTGGACGC
CACCGCATCG AGCATGTCGC AACGGTGGCG AAGAATGATG CCCCGCAATC TGGGGTCACA
TTCATTAACG ATTCGAAAGC TACGAACGCT CACGCAGCCC GCGCATCGCT TCTCTCGCTC
CCGTTATCGT CCACTGTGTG GATTGTTGGG GGGGTTACTA AAGGAGCGAA CCTAGATTCT
CTCATCGCCG AAATTGGCCC CCAACTGCGA AGTGCAGTCG TCATTGGTGT GGAGCATCAG
GAGATTGTGC GCGCATTTGC TCGACACGCC CCACACATCC CGGTCCACGT CGCCTCTGCA
GACGACACTG GGGGAGTGAT GCGCCATGCA GTGAACACGG CATGGAAAGC AGCAGAACCC
GGGGATGTTG TCATCCTCGC GCCCGCGTGC GCTTCGATGG ATCAGTTTGA TTCCTACGCG
CACCGTGGAG ATGAGTTCGT GCGGTGGGTC ACAGAGTTGA TCCCACCTGG CCAACAACGC
AAGGAGTAG
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| Protein sequence | MDRQLNRHSE LAKSLADSHV LVAGLGVSGQ AVVDVLTELP NGRHPASVSS LDAQAEGAHY
SSSSQVPWDS IDLVIASPGW PPHHEALTAA ADHAVPVWSE IELAWQLRVN NEHTNKPAPW
LAVTGTNGKT TTVELLATIL HADGLRVATV GNVGAPVIRQ IQNPTIDVFV LELSSFQLHF
TYSMEPLASA ILNIAEDHVD WHGSFDQYAS DKARIFTHTH RACVYSEGDD RVVRLLHEAD
VHPGARAISV SAESPTPSSL GIVDGVLCDR AFTEPLTGPQ RYRHAAELAQ LSDLAHLAGP
DGVVGSHTIT NTLFAAALAR AYGVAPRAVR DGVKSFQPGR HRIEHVATVA KNDAPQSGVT
FINDSKATNA HAARASLLSL PLSSTVWIVG GVTKGANLDS LIAEIGPQLR SAVVIGVEHQ
EIVRAFARHA PHIPVHVASA DDTGGVMRHA VNTAWKAAEP GDVVILAPAC ASMDQFDSYA
HRGDEFVRWV TELIPPGQQR KE
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