Gene Jden_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1063 
Symbol 
ID8380240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1132598 
End bp1133839 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content57% 
IMG OID645003804 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003161022 
Protein GI256832295 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.435169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAATG CTGTACGAGT GACCCAAGCG CGCCGGGACT GGGGCAGCGA TGATACCGGG 
CTGAACGTCA TGCATGTGGA CATGGATGCT TTCTATGCGT CGGTTGAGAT TGCGCAACGG
CCAGAGCTGC GGGGGCAACC AGTCATCGTG GCTGGAGGCG AACGCTCGGT CGTCTTAGCC
GCCTCTTACG AAGCTCGAGA GCTAGGCGTG CGATCTGCAA TGCCCACCCA ACGTGCCCGG
CTGCTTGCGC CGCACGCTGT CTGGGTGGCG CCTAGACATC ACGAATATGC GCGGATATCT
CGTTCGGTGA TGGACTACCT CGACACCATC ACTCCATGGG TAGAACAAGT TTCGATTGAC
GAGGCGTACC TTGACGTATC TGGAATACGT GGACCACAAG GAACCCTCTC TGCCCGTGCG
CAAGAATTGA GAGCTCAGGT TAAAGCCCAC CACGGGGTCA CCTGCTCGGT TGGTGTCGCC
GCCAATAAGT TTCTGGCTAA GCTCTGTTCC ACACAAGCAA AACCGGATGG ACTACTTGTC
CTGCCTCGTG GACAGGAACA AGAATTCCTC AACCTATTGC CCATCGGGGC GCTGATGGGT
ATCGGTGACA AGAGCGAGCG TCGATTGAAA CAACACGGAC TCCATACCAT CCGGGACGTC
GCTGCGCTGG AGCCAAGCTA TGTCGTCGCG CTCCTCGGTG CGACGCTGGG AAACCGCCTT
ATCCATCTTG CCCGAGGGAT TGACGACAGG CCTGTTACCC CAACGCGCGT GGAAAAGAGC
GTCGGTGCAG AACACACATT TGCTCAGGAC GAAGGAAGCA GAGAAGTATT GCGTGCCACC
GTTCGCTCTT TGGCGGACAC CGTGACATCG CGGCTGCGAA GTCGGGGCCT GCTTGCCCGC
ACCATATCGG TCAAGATCCG CGATGTGAAC TTCCACACGA TCACCCGGCA CGTGACTCTT
CATTCACCTA GCCAGTCACT TCACGTGGTC TTTAGTCAGG CGTGGACTTT GGTCGACCGT
CAACTTTTGC CGGGTCAACG CGCACGTTTG CTAGGCGTAA GAGCGGAACA GCTTGTCCCA
GAAGAAGGCC AGCCATTGAC GTTGACGCTC GAGGAATCTC TCACGGACCA CCATGACACG
ACAAGAAAAA CTGAGGAGAC AATCGACGCG ATTCGGGCGA AATTTGGGTC ACGGGCTATC
TCACTTGGAG TACAATCAGG TCTTCAACTA CCCAAGAGTT GA
 
Protein sequence
MSNAVRVTQA RRDWGSDDTG LNVMHVDMDA FYASVEIAQR PELRGQPVIV AGGERSVVLA 
ASYEARELGV RSAMPTQRAR LLAPHAVWVA PRHHEYARIS RSVMDYLDTI TPWVEQVSID
EAYLDVSGIR GPQGTLSARA QELRAQVKAH HGVTCSVGVA ANKFLAKLCS TQAKPDGLLV
LPRGQEQEFL NLLPIGALMG IGDKSERRLK QHGLHTIRDV AALEPSYVVA LLGATLGNRL
IHLARGIDDR PVTPTRVEKS VGAEHTFAQD EGSREVLRAT VRSLADTVTS RLRSRGLLAR
TISVKIRDVN FHTITRHVTL HSPSQSLHVV FSQAWTLVDR QLLPGQRARL LGVRAEQLVP
EEGQPLTLTL EESLTDHHDT TRKTEETIDA IRAKFGSRAI SLGVQSGLQL PKS