Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1059 |
Symbol | |
ID | 8380236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1127716 |
End bp | 1129914 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645003800 |
Product | Superfamily I DNA and RNA helicase-like protein |
Protein accession | YP_003161018 |
Protein GI | 256832291 |
COG category | [R] General function prediction only |
COG ID | [COG3973] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.394879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGAAC ACCGCGACAC CCTCGCACAG GAACAGCGTA TCGTCGATGC GCTTTACGCA CGGTTGGATG AGTTGCGTGA CGCGACTGCT GCTCGGCTCG CTGCCGTTCG TAAACAGGGA CCAACTGGCT CGCCGCAAAA CCGTTCTGAA CGGGATTCAT TTGCAACCCA TTATGAGGAT CGGCTCGCGT TGCTCCACGC GGTGGAAGAG CGTCTTGTCT TTGGTCACTT GTCACTGACT GATGATTCAA CCCGCCATAT TGGGCGGGTG GGGTTAACTG ATGCGCAGCA TCAGTCTATT TTGACGGACT GGCGCGCTCC GGCTGCGGAA CCGTTTTACC GTGCGACATT AGCGCATCCA CAGGGGGTAA TCCGGCGCAG GCACTTAACC ACCTCGGGGC GTCAGGTCAC TGCTGTCGAA GATGAGTTAC TCACGTTGAG TGACTCAGAT GAGGAACTTC CACCCCTGCA GGGGGAGGGG GCACTGCTTT CTGCAATGGC CCGGGGCCGG ACCGGAAAGA TGGGCGACAT TGTCGCAACA ATTCAGCGCG AACAAGACGA GATAATCCGC GCTCCTCTCC ACGGGGCCCA CGTTGTTCAA GGCGGGCCAG GAACCGGAAA AACTGCTGTT GCTTTACACC GTGCAGCATA TTTGTTGTAC GCACACCGCC GAGTATTGGA ACGCTCCGGG GTTCTTTTGA TTGGGCCTTC GTCAGCGTTT CTTCGCTATA TCGACCAAGT TCTTCCCTCA CTTGGCGAGA CAGGTGTAGT GTCCACAACA CTAGCCTCAT TGATGCCCGG TGTTGTTGCG GAAGCAGAAG ACTCCCCTGA GGCCGCAGCC TTAAAGGGTG ACGTGCGCTT TGCGCGCTAT GTGCGTGCCG CTGTCAAAGC CCGCCAACAG GTGCCGTCGC AAAACACAAC ACTGCGCATC GACGGTCATC TGCTTGTGGT CACCCCCCGT GACGTTAAAG AATCGATGAC CCGTGCACGA CGGGCCAACA AACCGCACAA CGAAGGATGG GACATCTTCG CTCGTGACAT GCTCAATAAG TTGGCCGCGC AGTACGCCCA AGACATGCCA TACCACGTTG CAGCAGAAGA CCGCGCAGAC ATCATTGCTG AGTTGCGCTC ACATCGCGAG GTACGCCGCC TGATCAACCT TGCGTGGTTC CCCATCAGCG CCCCGCAACT CGTTGATGCG CTCCTGTCGC GCCCACATCG CCTCCTCCAG GCAGCTCCAG ACCTAACCGA CGCTGAACGA TCAGCTCTTC TTCGACCTCC TGGCTCCGCA TGGACAACCT CGGACATCCC ATTACTGGAT GAAGCTGAGG AACTCCTCGG CCCGTTGCCA GGGCGCAACC ACCAAGCGCC CTCCCCCAGT GTCGACCACG AATACGCCCA AGCGGTGATC AACGAAACTG GTGTTGCGGG TTTAGTAAGC GCCCACGATT TGGAAGCACG ATTTCGAGCC CACGGTCCGG TCATGTCCTT GGCTGAACGA GCTGGCAGTG ACCGGCAATG GACATATGGT CACGTCATCG TGGACGAAGC ACAAGAATTG TCTCCGATGG ACTGGCGAAT GCTGATACGC CGCTGCCCAA CACGGTCCTT CACCATCGTG GGTGATACAG CCCAAACTTC GCGAGCTGGT GGTGCACGGA CCTGGGAGGG TATGTTCACA CCCGTGTTTC GCGAGCACTG GACCCAGCAT ACGTTGACTA TTAACTACCG TACTCCAGCT GCGATCGCTG ACACGGCAAT GCGTTATGCG CATCATGCAG GACTGACCAC GTCTCCTCTC ACCTCGGCTC GTGATGTCGC AGGAGCACTC GATGTGATTC GGGTTCCTGA TGATGGCTGG GACAACACTC TTGTGACCGC TGTCAACGAG GCGATCAGCC GGTTTATCTC GGCCGACCGA GGGCAAGTCG CCGTCATCAC AAGTTCACGA CAGTTGTCTC GCATCACGTC ACTGGTCGAC ACGTGCGTTG CTCGTCACGG TGATGTTCGG CGTGGATCCG TGGACACCCT GACACCACGC GCGGTGAAAG GTCTAGAATT CGATGCAGTC ATTCTTGTTG ACCCTCAGGA GATCGAGGAT GAAGTTGGGG CTTCGGATCT GTTCGTTGCT TTAACGAGAC CAACCCAGCA CCTTTGTGTC CTGACACCAT CTCGTGCACC GTGGTTCTCC GCCCAGTGA
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Protein sequence | MAEHRDTLAQ EQRIVDALYA RLDELRDATA ARLAAVRKQG PTGSPQNRSE RDSFATHYED RLALLHAVEE RLVFGHLSLT DDSTRHIGRV GLTDAQHQSI LTDWRAPAAE PFYRATLAHP QGVIRRRHLT TSGRQVTAVE DELLTLSDSD EELPPLQGEG ALLSAMARGR TGKMGDIVAT IQREQDEIIR APLHGAHVVQ GGPGTGKTAV ALHRAAYLLY AHRRVLERSG VLLIGPSSAF LRYIDQVLPS LGETGVVSTT LASLMPGVVA EAEDSPEAAA LKGDVRFARY VRAAVKARQQ VPSQNTTLRI DGHLLVVTPR DVKESMTRAR RANKPHNEGW DIFARDMLNK LAAQYAQDMP YHVAAEDRAD IIAELRSHRE VRRLINLAWF PISAPQLVDA LLSRPHRLLQ AAPDLTDAER SALLRPPGSA WTTSDIPLLD EAEELLGPLP GRNHQAPSPS VDHEYAQAVI NETGVAGLVS AHDLEARFRA HGPVMSLAER AGSDRQWTYG HVIVDEAQEL SPMDWRMLIR RCPTRSFTIV GDTAQTSRAG GARTWEGMFT PVFREHWTQH TLTINYRTPA AIADTAMRYA HHAGLTTSPL TSARDVAGAL DVIRVPDDGW DNTLVTAVNE AISRFISADR GQVAVITSSR QLSRITSLVD TCVARHGDVR RGSVDTLTPR AVKGLEFDAV ILVDPQEIED EVGASDLFVA LTRPTQHLCV LTPSRAPWFS AQ
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