| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1058 |
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| Symbol | |
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| ID | 8380235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1126403 |
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| End bp | 1127653 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645003799 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_003161017 |
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| Protein GI | 256832290 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGACCA AACCCACTCA GGAAGAAAAT GGAGGCGTGT TGAAAGCGCT GCTTCTGGAA
AACGTCCATC CCACCGCCGT AGAAATCCTC TCCTCTCATG GATACGAGGT CATTACACGA
TCTGGGGCAC TCGATGAGGC GGAACTCATC GAAGCTCTCC AAGGCGTCCA TCTACTCGGC
ATCCGATCAA AGACGCAGGT AACGCGTCAG GTCATTGATC ACGCCCCTGA CCTCATCGCG
ATCGGCGCAT TTTGTATCGG CACCAACCAG ATCGACTTAG GCGCAGCAGC GGAACGTGGA
GTCGGTGTTT TCAATGCTCC GTTCTCAAAT ACTCGTTCAG TTGTCGAGAT GGCGATCTCT
GAAATGATCT CGCTGACACG CCGGCTACCA GAACGTAATA AGGCCATGCA CGACGGTGTG
TGGGACAAAA CCGCCGATGG ATCTCACGAG ATCCGCGGGA AGACCCTGGG CATCATTGGG
TACGGAAACA TTGGTACTCA GTTATCAGTC CTTGCTGAGA ACCTTGGAAT GTCGGTCATT
TTCTATGACA CGGCTGAAAA ACTCGCCCTG GGGAACGCAC GACGGGCTAC CACCTTGGAA
GAGTTGTTGG GCGCCGCAGA CGTGGTGACA ATCCACGTCG ATGGCAGGCC TGGTAACGCT
GGCCTTTTCG GTGCAGAACA GTTCGCTGCC ATGAAACGAG GCGCTATTTT CCTCAACCTC
TCGCGGGGTT TTGTCATGGA CAACGAGGCA CTCCGTGACG CCATCATGTC AGGTCATGTC
GCAGGAGCGG CAGTCGATGT GTTCCCCACC GAACCGAAAA AACGTGGGGA CGCGTTTGAC
TCTGAACTGC GTGGGTTGGC GAACGTGATC CTCACTCCTC ACATTGGTGG TTCCACCCTT
GAGGCTCAGG AATCTATTGG TGAGTTCGTC GCCAACAAGC TACGTGACTA TGTCCGCACC
GGTTCGACGA CTCTGTCTGT GAATCTTCCG AACCTGGCAC TTGAAACGAC TGGCTCGATC
ACCCGCATCG CATTCCTCCA CCGCAACACC CCTGGGGTGC TTGCTGCCGT CAACAATGCG
CTCGCAACGC ACAACGTCAA CATCGACGGC CAGTTGTTGG CGACACGCGG TGAGTTTGGG
TATGTCGTCA CTGACGCTGG TTCCTCAGTT GACCCTGAAG TTCTGAACGC ATTGAAAGAT
ATTGACCAGT ACATTCGCAT CCGTGTGATG CCCCCATCTC ACTTGCGGTG A
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| Protein sequence | MVTKPTQEEN GGVLKALLLE NVHPTAVEIL SSHGYEVITR SGALDEAELI EALQGVHLLG
IRSKTQVTRQ VIDHAPDLIA IGAFCIGTNQ IDLGAAAERG VGVFNAPFSN TRSVVEMAIS
EMISLTRRLP ERNKAMHDGV WDKTADGSHE IRGKTLGIIG YGNIGTQLSV LAENLGMSVI
FYDTAEKLAL GNARRATTLE ELLGAADVVT IHVDGRPGNA GLFGAEQFAA MKRGAIFLNL
SRGFVMDNEA LRDAIMSGHV AGAAVDVFPT EPKKRGDAFD SELRGLANVI LTPHIGGSTL
EAQESIGEFV ANKLRDYVRT GSTTLSVNLP NLALETTGSI TRIAFLHRNT PGVLAAVNNA
LATHNVNIDG QLLATRGEFG YVVTDAGSSV DPEVLNALKD IDQYIRIRVM PPSHLR
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