Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1048 |
Symbol | miaA |
ID | 8380225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1115933 |
End bp | 1116910 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645003789 |
Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
Protein accession | YP_003161007 |
Protein GI | 256832280 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.982458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.656771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGGTG AGCTACCTCC GTTGGTGGCG ATTGTGGGCC CGACGGCGAC GGGGAAGTCG TCGTTGGCGG TTGCCGTTGC ACATGCGTTG GGCGGGCCTG ATCGGGTTGA GATCGTGTCG GGTGACGCGT ACCAGTTGTA CCGCGGCATG AGTATTGGGA CCGCCGCGAT GACGATGCAC GAGCGGCAGG GGATTGTGCA CCACCTTGTT GGTGTGGTTG ACCCCCAGGT GGATTTGTCT GTTGCGCAGT ATCAGCGTGA TGCACGCGCT GCAATTCAGG ATGTTGAAAT GCGCGGTAAA CGGGCAATTT TGGTGGGTGG GTCGGGTTTG TATATTCGCG CCGTTGTGGA CGATATGCAG TTCCCTGGTA CTGATGATGC GGTGCGGGGT GAGCTGGAGA AGCGGGCAGC TGAACATGGC AGTCAGGCGT TGTTTGAGGA GTTGGTTGCG CGTGATCCAC AAGCAGCGCA CCGGATGGGG GCGTCCAATG AGCGTCGTAT CATTCGGGCG TTGGAAGTCA TCACGATCAC GGGTCGTCCG TTTACTGCTT TTTTGCCGCA AGCAACATAT GTGCGCCCTA CTGTGACGAT CGGGGTGGAT TGTGATCGGA GTGTGCTGGA TCAACGGGTC GAAAGTCGTG TGCACACGAT GATCTCTCAA GGTCTTGAGG ACGAAGTGCG CAGTGTTCTC CAGCAGGGGA TGGGGCGGAC TGCGTCGCGA GCCGTTGGTT ATGCGGAATT TCTCCGCTAT TTTGATGGGG AAATTTCCCG GGACCAAGCA GTTGCTGACA TCATCACTCA CACCCGCCGC CTGACACGCA AACAGATGGG CTGGTTTGGT AGAGATTCAC GCACGCAGTG GATCGATGCG CTATCCCCAT CTGTCCTGCA CGATGCGTTG GTGTGCATTG ATCGTGCCGA TCACGGTGAG ATCTTTTTGT CCGACACCAC GCCCACACGT CGTAGGCTGG GTACATGA
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Protein sequence | MKGELPPLVA IVGPTATGKS SLAVAVAHAL GGPDRVEIVS GDAYQLYRGM SIGTAAMTMH ERQGIVHHLV GVVDPQVDLS VAQYQRDARA AIQDVEMRGK RAILVGGSGL YIRAVVDDMQ FPGTDDAVRG ELEKRAAEHG SQALFEELVA RDPQAAHRMG ASNERRIIRA LEVITITGRP FTAFLPQATY VRPTVTIGVD CDRSVLDQRV ESRVHTMISQ GLEDEVRSVL QQGMGRTASR AVGYAEFLRY FDGEISRDQA VADIITHTRR LTRKQMGWFG RDSRTQWIDA LSPSVLHDAL VCIDRADHGE IFLSDTTPTR RRLGT
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