| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1044 |
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| Symbol | |
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| ID | 8380221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1112527 |
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| End bp | 1114131 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003785 |
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| Product | RNA modification enzyme, MiaB family |
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| Protein accession | YP_003161003 |
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| Protein GI | 256832276 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.852588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCC CACATGTTCC GCAACGTGCG TTGGACACCC AACCTCGGAC CTACACCGTG
AAGACCCTTG GGTGCCAGAT GAACGTCCAC GATTCTGAAC ACATGGCGGG GTTGCTTGAG
CAAGCAGGGT ATGTGAAAGC CCCCGATGGA TCAGATGCCA CTGGCGACGC GGACATTGTG
GTCATCAACA CCTGTGCAGT GCGGGAAAAC GCAGCCAATA AGCTGTATGG CCAGCTAGGG
CAGCTCGCAG CGATCAAACG CACCAAACCA GGAATGCAAA TTGCTGTTGG TGGTTGCTTG
GCCCAAAAAG ATCGCGGAGT GATCGTTGAA CGCGCCCCGT GGGTGGACGT TGTTTTTGGC
ACCCACAACC TCGATGTGTT GCCGGTGTTG TTGGAACGCG CACGCCACAA CGAGGAGGCT
CAGGTTGAGA TCGCCGAGTC GCTCCAGGTG TTCCCGTCGA CCTTGCCAAC GCGGCGAGAG
TCGGTTTATG CGGGTTGGGT CAGTATTTCT GTGGGGTGTA ACAACACGTG CACTTTTTGT
ATCGTTCCGC ATCTGCGCGG TAAGGAACGT GACCGTCGCC CCGGTCAGAT CCTTGCCGAG
GTTGAGGCCC TTGTCGCTGC CGGTGCTGTG GAAGTGACTT TATTGGGACA GAACGTCAAT
AGCTATGGCG TCGAGTTCGG GGATCGAGGA GCTTTTGCCA AGCTCCTTCG TGCCTGTGGT
GATATTGAAG GGTTGGAGCG TGTTCGGTTC ACCTCGCCGC ACCCCGCAGC GTTCACTGAC
GATGTCATCG AAGCGATGGC TCAAACTCCT AACGTGATGC CATCCTTACA CATGCCATTG
CAGTCGGGAT CGGATCGAAT CTTGCGCGCG ATGAGACGTT CTTATCGATC AGAGAAGTTT
TTAGGAATCC TTGATCGAGT GCGCACCGCA ATGCCGGATG CGGCGATCAC CACGGATATT
ATTGTCGGTT TTCCTGGGGA GACGGAAGAA GATTTCCAGG CGACCCTTGA TGTTGTCCGG
CAGTCACGAT TCGCGTCAGC CTTCACGTTC CAGTATTCGC CTCGACCGGG AACGCCGGCT
GCGACGTTAG ATGGGCAACT GCCTAAAGAG GTGGTTCAAG AACGCTATGA GAGACTTCTT
GCTGCTCAAG ACGAGATCAG TGCTGCAGAG TCACAAGCAC TTGTCGGCCG AACGGTTGAG
GTGCTTGTCG CCGAGTCCGA TGGGCGCAAG GATGACGCGA ACCATCGTTT AACCGGGCGA
GCCCAAGACA ATAGACTGGT CCACTTCGCG TTGCCGAAGG GCGTGGATTG GGATGGTGCA
CAGGTTCATC CTGGTGATAT ACGCCTAGCA GATGAGGTCC CAACGCTTGT TCCCCGCCCG
GGGGACATGG TGAAGGTGGA TGTCACGCGG GGAGCCCCGT TTTATGTTGT TGCCGACTCA
GCGGTCAATG GGGGGCGGTT TGAGGTACGG CGCACCCGGG CGGGGGATGC GTGGGCTCGC
CGTGAAAAAA CTCGGTTGGG GCTTCTCGCT GAAGAACACT CCCATGGAGG GCCGCCGACT
ACTGCTGGTG GAGTACTTCT GGGTATGCCA CAACGACGTC AGTGA
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| Protein sequence | MTSPHVPQRA LDTQPRTYTV KTLGCQMNVH DSEHMAGLLE QAGYVKAPDG SDATGDADIV
VINTCAVREN AANKLYGQLG QLAAIKRTKP GMQIAVGGCL AQKDRGVIVE RAPWVDVVFG
THNLDVLPVL LERARHNEEA QVEIAESLQV FPSTLPTRRE SVYAGWVSIS VGCNNTCTFC
IVPHLRGKER DRRPGQILAE VEALVAAGAV EVTLLGQNVN SYGVEFGDRG AFAKLLRACG
DIEGLERVRF TSPHPAAFTD DVIEAMAQTP NVMPSLHMPL QSGSDRILRA MRRSYRSEKF
LGILDRVRTA MPDAAITTDI IVGFPGETEE DFQATLDVVR QSRFASAFTF QYSPRPGTPA
ATLDGQLPKE VVQERYERLL AAQDEISAAE SQALVGRTVE VLVAESDGRK DDANHRLTGR
AQDNRLVHFA LPKGVDWDGA QVHPGDIRLA DEVPTLVPRP GDMVKVDVTR GAPFYVVADS
AVNGGRFEVR RTRAGDAWAR REKTRLGLLA EEHSHGGPPT TAGGVLLGMP QRRQ
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