| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1033 |
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| Symbol | |
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| ID | 8380210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1096378 |
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| End bp | 1098063 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003774 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_003160992 |
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| Protein GI | 256832265 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.76638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCATC CCCATCCCGA ACTTCCCACC CCACCTGCTT TGGCCGACGG TACGCTCCGT
ATCGTTGCGC TCGGTGGGTT AGGTGAGATA GGCAGAAACA TGGCGGTCCT CGAGTACGGA
GGACGGCTTC TTATCATCGA CTGCGGAGTG CTTTTCCCCG AGGATCACCA ACCAGGCGTC
GACCTCATCC TGCCTGACTT CAGTTACATC GCTGATCGCA TGGACGATGT AGACGCGATT
GTCTTGACGC ACGGCCATGA GGACCACATC GGTGGAGTTC CTTACTTGCT GCGGTTGCGT
CGTGATGTGC CGATCATCGG ATCAAAGCTC ACGTTAGCTT TTATCGAAGC CAAGCTTAAA
GAGCATCGCA TCACCCCCAC CACGATTGAG GTGAAAGAAG GGGAGAAGCT TTCTCGCGGG
ATTTTCGATC TTGAATTTGT TGCGGTGAAC CACTCCATCC CTGATGCGCT TGCTGTTGCT
GTCTCCACCC CGGCGGGACG TGTCTTGCAT ACTGGTGACT TCAAAATGGA CCAGTTGCCG
CTCGATGGTC GCATCACCGA TCTTCGTGCG TTTGCCAGGC TTGGTGAGGA AGGGGTTGAC
CTTTTTATGG TTGACTCCAC AAACGCTGAA GTGCCTGGGT TTGTGACTCC AGAACGTGAG
ATCGGACCTG TCCTTTCTGA TGTCTTCTCA CGCTCGGAGG GCCGTGTAGT TGTTGCGTCG
TTCGCCTCGC ATGTGCACCG TGTTCAACAG GTTTTGGATG CAGCACACGA GCATGGTCGC
CATGTCGTTT TTGTGGGGCG GTCTATGGTC CGGAACATGG GCATTGCGGC TGATTTAGGG
TACTTGAAGG TGCCAGATGG GGTCCTCGTT GATCTCAAAG CGGTTGACCA CTTGCCGGAC
AACCGTGTGG TCTTCATGTG CACGGGTTCG CAGGGCGAAC CTATGGCTGC TTTGTCGCGC
ATCGCGAACC AGTCCCACCG GATTGCTGTG GGGCAAGGGG ACACAGTGAT TCTCGCGTCG
TCGATGATTC CGGGCAACGA GTCACAGGTG TACCGCGTGA TTAACGGGCT GATGCGACTG
GGCGCGAAGG TCGTGCATTC AGGCAACGCG AAGGTCCACG TGTCGGGTCA CTCTTCGGAG
GGGGAGTTGA CGTATTGTTA CAACATCTTG CGCCCGCGTA ATGTCATGCC CGTGCATGGT
GAGGTGCGAC ACCTCATTGC CAATGGTGCT ATTGCCGTGA AAACAGGTGT TCCACCGAAG
AACGTGATCC TCGCAGAGGA CGGTGTTGTG GTGGATCTTG TCGATGGGCA AGCCACAATT
GTGGGTGCTG TGCCGTGTGG CTACGTGTAC GTGGATGGCT CAAGTGTCGG GGAAATCACC
GAAGCTGAAC TGAAGGATCG CAAGATCCTG TCTGAAGAAG GGTTTATTTC GCTCTTTGCT
GTCGTTGATG CGTCGACCGG AAAAGTGGTC GGTGGACCAC AGATCCTTGC ACGGGGGTTT
GCTGAGGAAG ACTCTGTCTT TGATGACATT CGCCCCCAGG TTGTGGCCGC CTTGGAGGAG
TCGGCTGCGT CAGGTAACGC CGATACTCAC CAATTGCAAC AGGTGATGCG TCGCACGGTT
GGTCGATGGG TGGCAACGAA GTTGCGCCGT AAACCCATGA TCATCCCGGT GGTTGTTGAG
GCGTAG
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| Protein sequence | MSHPHPELPT PPALADGTLR IVALGGLGEI GRNMAVLEYG GRLLIIDCGV LFPEDHQPGV
DLILPDFSYI ADRMDDVDAI VLTHGHEDHI GGVPYLLRLR RDVPIIGSKL TLAFIEAKLK
EHRITPTTIE VKEGEKLSRG IFDLEFVAVN HSIPDALAVA VSTPAGRVLH TGDFKMDQLP
LDGRITDLRA FARLGEEGVD LFMVDSTNAE VPGFVTPERE IGPVLSDVFS RSEGRVVVAS
FASHVHRVQQ VLDAAHEHGR HVVFVGRSMV RNMGIAADLG YLKVPDGVLV DLKAVDHLPD
NRVVFMCTGS QGEPMAALSR IANQSHRIAV GQGDTVILAS SMIPGNESQV YRVINGLMRL
GAKVVHSGNA KVHVSGHSSE GELTYCYNIL RPRNVMPVHG EVRHLIANGA IAVKTGVPPK
NVILAEDGVV VDLVDGQATI VGAVPCGYVY VDGSSVGEIT EAELKDRKIL SEEGFISLFA
VVDASTGKVV GGPQILARGF AEEDSVFDDI RPQVVAALEE SAASGNADTH QLQQVMRRTV
GRWVATKLRR KPMIIPVVVE A
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