| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1015 |
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| Symbol | |
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| ID | 8380192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1074951 |
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| End bp | 1076735 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645003756 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003160974 |
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| Protein GI | 256832247 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTAC GCCTATCCAC ACTTTTTGTG CGCACCTTGC GCGAAGATCC TGTTGACGCC
GAGGTTGCGA GCCACCGGTT GCTTGTTCGC GCCGGCTACA TCCGCCGGGC AGCGCCTGGT
ATTTATTCGT GGCTACCTTT GGGGCTGCGC GTGCTCGATA AAGTGGACGC GGTCGTACGC
GAAGAAATGG AACGTGCCGG AGCTCAGCGG GTACATTTCC CTGCGCTGCT GCCACGAGAA
CCTTACGAAG CGACGGGCCG ATGGACAGAA TATGGTCCCA ATCTCTTTCG CTTGCAGGAC
CGTAAAGACG GCGACTATTT ACTCGCTCCC ACACACGAAG AAATGTTTAC TCTCCTTGTC
AAGGACTTGT ATTCCTCCTA CAAGGACCTT CCTGTCACGC TGTACCAAAT TCAAACGAAG
TACCGTGACG AAGCCCGGCC ACGTGCGGGA CTCATTCGCG GTCGCGAATT TATCATGAAA
GACGCCTATT CGTTTGATCT CACTGAGGAA GGCTTAGCTG AGTCCTATCG GGCTCAACGT
GACGCCTACG AACGGATTTT TCGCCGTCTC GGACTGGATT ACGTCATTGT TGCTGCCACT
TCAGGGGCCA TGGGTGGGTC ACGTTCCGAA GAGTTCCTTA CCCCAACAGA CATCGGTGAG
GACACGTTCG TGCGATCACC GGGAGGGTAC GCGGCAAACG TCGAAGCGGT CACAACTATT
GCCCCACCCG CGCAAGACGC GACCAATGTT CCCGCTGCAC AAACTGTCAA TACACCAGGC
GCATCGACTA TTGATGCGTT AGTGACCTGG CTTAACGATC ACGAACCTCG TGAAGACCGA
GCCTGGACCG CCGCAGACAC GTTGAAGAAT GTCGTTGTCG CTGTGACCCA CCCAGATGGT
GAACGGGAAG TTCTCGTCAT CGGTATCCCC GGTGATCGGG ACATCGACAT GAAACGGTTG
GAAGCGAGCC TCGCACCCGC AGAAGTTGAC ACCGCAACAG ATACCGACTT CGCGCGCAAT
CCTCACCTCG TTCGAGGTTA CATTGGCCCG CAGATCCTTG GCCGTCATCA CACCCACGAT
GACGACGCGA TCCGTTACCT CGTTGATCCG CGCATCGCAG ATGGTACTGA ATGGGTGACC
GGTGCCAACA TTACCGACCA CCACCAGTTG CACGTGGTTG CAGGGCGGGA TTTCCACGCT
GATGGAACCA TTGAAGCAGC GCAGGTGCGG GCAGGAGACC CTGCCCCTGA TGGGTCTGGC
CCCTTAGATC TCGCACGGGG AATAGAAATC GGGCACATCT TCCAACTTGG CCGGAAATAT
GCTGAAGCTC TCGGGCTGAA GGTGTTGGAT GTGAACGGTA AACACACGAC GGTGACCATG
GGCTCCTACG GTATTGGAGT GACCCGAGTC ATGGCGGCAC TGGCTCAAGC TCACCATGAT
AGTCAAGGCC TTGCCTGGCC GATCCAGGTC GCACCGGCTC ACGTGCATCT TGTGGCCACC
GGTAAAGATG CCCGAATTTT TGAGGCTGCA GAGTCACTTG CTCAACGTCT GAGCGACCGA
GGGGTCGAAG TGATCTATGA CGACCGGGTC AAAGTTTCAC CAGGAGTGAA GTTCAAGGAT
GCAGAACTGT TCGGTGTTCC TTTTATCGTT GTTGTCGGTC GCGGACTCGA CGAGGGGACT
ATTGAGTTCC GTACGCGAGT GGGTGAGCCG CAACAAGTGC ACATCAACGA TGCAGTTGAT
GTGGTGACAG ATGCTGTCGC CGCGCAACTT GGGGGCAACC ACTAG
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| Protein sequence | MLLRLSTLFV RTLREDPVDA EVASHRLLVR AGYIRRAAPG IYSWLPLGLR VLDKVDAVVR
EEMERAGAQR VHFPALLPRE PYEATGRWTE YGPNLFRLQD RKDGDYLLAP THEEMFTLLV
KDLYSSYKDL PVTLYQIQTK YRDEARPRAG LIRGREFIMK DAYSFDLTEE GLAESYRAQR
DAYERIFRRL GLDYVIVAAT SGAMGGSRSE EFLTPTDIGE DTFVRSPGGY AANVEAVTTI
APPAQDATNV PAAQTVNTPG ASTIDALVTW LNDHEPREDR AWTAADTLKN VVVAVTHPDG
EREVLVIGIP GDRDIDMKRL EASLAPAEVD TATDTDFARN PHLVRGYIGP QILGRHHTHD
DDAIRYLVDP RIADGTEWVT GANITDHHQL HVVAGRDFHA DGTIEAAQVR AGDPAPDGSG
PLDLARGIEI GHIFQLGRKY AEALGLKVLD VNGKHTTVTM GSYGIGVTRV MAALAQAHHD
SQGLAWPIQV APAHVHLVAT GKDARIFEAA ESLAQRLSDR GVEVIYDDRV KVSPGVKFKD
AELFGVPFIV VVGRGLDEGT IEFRTRVGEP QQVHINDAVD VVTDAVAAQL GGNH
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