| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1009 |
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| Symbol | |
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| ID | 8380186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1068505 |
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| End bp | 1069635 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645003750 |
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| Product | ribosomal RNA large subunit methyltransferase N |
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| Protein accession | YP_003160968 |
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| Protein GI | 256832241 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
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| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.834278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACG TACTTCCCAC CCCGTCCCTC GTTCCGCTTC AAATGACAGC CCCAAAGCGT
GGGAAAGCGC CCCGCCACTT TGCGGACATG ACCCCCCAGG AACGACGCGA TGTTGTGACG
GAACTTGGAC ACCAACCGTT TCGTGCCAAG CAGCTAGAAA CTCACTATTT CTCACATCTC
ACGGACAATG CAGATGAGAT GACGGACCTG CCTGCGCAAG CAAAATCTGA ACTTGTCGGA
GCGTTGATGC CTCCGTTAGT GTCAAAAATT CGTACCCTCG AGGCCGACGG AGGGGCAACG
GTCAAAACGT TGTGGCGTTT GTTCGATGGA ATCAAAATCG AATCCGTTCT CATGCGGTAC
CCCACCCGTT CGACGTTGTG TGTGTCAAGC CAGGCAGGAT GCGGGATGGC GTGCCCATTT
TGTGCTACTG GTCAAATGGG ATTGACCCGA AACCTGTCCA CAGCTGAGAT CGTTGAACAA
GTCCGACAAG CGGCTCGCGC CCTGGCTCAG GGGGAGATTC CCGGAGGCGC AACGCACCTG
AATAATCTCG TGTTTATGGG GATGGGAGAG CCTTTAGCGA ACTACAAAGC TCTCATGGGA
GCGGTCCGAC AATTTGTTGC GCCGAGCCCA CAAGGGTTTG GGCTATCTGC TCGCAACATC
ACGGTGTCAA CTGTCGGGCT GGTGCCAGCC ATCAATAAAC TCGCCAAAGA GGGTTTGCCA
CTGACACTAG CGTTGAGTTT GCACGCCCCT GACGACGAAT TACGCTCTCA ACTTGTTCCG
ATTAACACCC GGTGGACTGT GGATGAGGCG CTCGATGCTG CTTATGGCTA CTACGATGCA
ACGGGTCGTC GAGTCTCGAT CGAGTATGCC TTGATCAAGG ACATGAACGA TCATGCATGG
CGTGCGGACC TGTTAGGGGA AAAACTCAAC GCGCGCGGCC GCGGATGGGT GCATGTGAAT
CCTATTCCGT TGAATCCAAC ACCAGGGTCA ATTTGGACTG CCAGTGACCG TGATGTTGAG
CAGGAGTTTG TGAGGCGCTT GCGTTCGCAC AATATTCCGA CAACAATTCG TGACACGCGG
GGGAGTGACA TCGATGGTGC CTGCGGTCAA CTGGCCGCAG AGGACGAGTA A
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| Protein sequence | MPDVLPTPSL VPLQMTAPKR GKAPRHFADM TPQERRDVVT ELGHQPFRAK QLETHYFSHL
TDNADEMTDL PAQAKSELVG ALMPPLVSKI RTLEADGGAT VKTLWRLFDG IKIESVLMRY
PTRSTLCVSS QAGCGMACPF CATGQMGLTR NLSTAEIVEQ VRQAARALAQ GEIPGGATHL
NNLVFMGMGE PLANYKALMG AVRQFVAPSP QGFGLSARNI TVSTVGLVPA INKLAKEGLP
LTLALSLHAP DDELRSQLVP INTRWTVDEA LDAAYGYYDA TGRRVSIEYA LIKDMNDHAW
RADLLGEKLN ARGRGWVHVN PIPLNPTPGS IWTASDRDVE QEFVRRLRSH NIPTTIRDTR
GSDIDGACGQ LAAEDE
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