Gene Jden_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1007 
Symbol 
ID8380184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1067046 
End bp1067603 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content51% 
IMG OID645003748 
Productribosome recycling factor 
Protein accessionYP_003160966 
Protein GI256832239 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACG AAATTTTGCT TGAGGCAGAA GAAAAGATGG ATCGTGCTGT TGAGGTAGCG 
AAGGAAGAGT TCGCAGCCAT CCGCACGGGC CGCGCGAACG CCGCCATGTT CTCAAAGATC
ACGGTGGATT ATTATGGGGC TCCAACTCCT TTGCAACAGC TTGCCTCGAT GAACATTCCT
GAAGCGCGCA CAGTGTTGAT CTCTCCTTAT GACAAGTCTG CAATGTCTCT CATTGAAAAA
GCTCTGAGAG ATTCAGATCT TGGGGTGAAC CCGTCCAATG ACGGGAATGC CATCCGCATC
AATCTTCCTG CTTTGACAGA AGAACGCCGC CGTGACTACG TCAAATTGGC AAAGAACAAA
GGCGAAGAAG GTCGTGTCTC CGTCCGCAAC ATTCGACGGA AGGCTAAAGA CCAATTGGAC
CGTCTTGTGA AAGATGGTGA ACTGTCTGAG GACGAAGGAA CTCGAGCGGA AAAAGAGCTC
GAGGCGCTCA CTCGCCGGCA CGTCGACGAG ATCGATACTC TGCTTGCTGG TAAAGAAGCT
GAACTTCTCG AGGTCTGA
 
Protein sequence
MSDEILLEAE EKMDRAVEVA KEEFAAIRTG RANAAMFSKI TVDYYGAPTP LQQLASMNIP 
EARTVLISPY DKSAMSLIEK ALRDSDLGVN PSNDGNAIRI NLPALTEERR RDYVKLAKNK
GEEGRVSVRN IRRKAKDQLD RLVKDGELSE DEGTRAEKEL EALTRRHVDE IDTLLAGKEA
ELLEV