Gene Jden_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1005 
Symbol 
ID8380182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1065294 
End bp1066133 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content57% 
IMG OID645003746 
Producttranslation elongation factor Ts 
Protein accessionYP_003160964 
Protein GI256832237 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAACT ACACTGCCGC TGACATTAAG GCCCTACGCG AGCGCACCGG TGCCGGCATG 
CTCGACGTCA AGAAGGCACT GGACGAAGCT GCCGGTGACA TGGAAAAGGC CACAGAAATC
CTTCGCGTGA AGGGTTTGAA AGGTGTGGCG AAGCGTGAAG GTCGCGCTAC CTCTGAGGGT
TTGGTTGCCG CACACATCGC CGAGTCCGCA GCCGGCCAAC GCGGTGTGCT CATTGAGGTC
AACTGCGAAA CGGACTTCGT TGCAAAGTCT CAGAAGTTCA TTGACCTCGC TGACAAAGTT
CTTGCAGCTG TTGCAGCGTC CGGTGCTGAC AACGCTGACG CAGCTCTAGC TGCCGAGGTT
GATGGCACGA CCATCCAAGT GATGATTGAT GAAGAAGCGG CAACGCTCGG CGAGAAGATC
GTTCTTCGTC GCGTTGCTGT CGTTGAAGGC CCGACTGTGA CACAGTACCT TCACCGCACT
GCAAAAGACC TCCCCCCGTC AATTGGTGTT TTTGTCGTCA CGAACGCCCC CGGGCAAGCC
GTTGCTAAAG ACATCGCACA GCACATCGCT GCTCTAGCTC CAGAGTTCCG GGCTCGTGAA
GACGTCCCTG CTGAACAAGT GGAGAACGAG CGTCGTATCG CAGAGGAAAC CTCACGTAAT
GAGGGCAAGC CTGAAGCGGC GCTCCCGAAG ATCGTGGAAG GTCGCCTCAA CGGGTACTTC
AAGAGTGTTG TTCTCCTCGA ACAGCCCTTG GCCAAGGACC CAAAGAAGAC GGTCGACCAA
ACGCTGTCCG AGGTTGACGG AGAGCTCCAG GAATTCGTTC GTTTCCGCGT CGGTTCCTGA
 
Protein sequence
MANYTAADIK ALRERTGAGM LDVKKALDEA AGDMEKATEI LRVKGLKGVA KREGRATSEG 
LVAAHIAESA AGQRGVLIEV NCETDFVAKS QKFIDLADKV LAAVAASGAD NADAALAAEV
DGTTIQVMID EEAATLGEKI VLRRVAVVEG PTVTQYLHRT AKDLPPSIGV FVVTNAPGQA
VAKDIAQHIA ALAPEFRARE DVPAEQVENE RRIAEETSRN EGKPEAALPK IVEGRLNGYF
KSVVLLEQPL AKDPKKTVDQ TLSEVDGELQ EFVRFRVGS