| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1002 |
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| Symbol | |
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| ID | 8380179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1062637 |
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| End bp | 1063488 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645003743 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_003160961 |
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| Protein GI | 256832234 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.814788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCC TCGCACCTAC AGCAGCAAAT CAGACAACTG TCGGCACCGA TGCCCCGGTT
GCAGAACCAT CAGACAACAC CAACTGTCCT CGCACCGTGC GTCAGTTATG GGATGCCTAT
AAGGCGAATC CCACCGCGCT GGGTCGTGAG GAACTCATCC TGCACTACGC GCCCTTGGTC
ACGATGATTG CCGGACGTGT GGGGATGAAG CTTCCCAATA CTGTGGAAGC TGCGGATCTT
GTGTCGTATG GGATGTTTGG TCTTATCGAC GCGATTGATA AGTTCGACCC GTCCCGCGAC
ATTAAGTTTG AAACTTACGC GTCAACTCGA GTTCGTGGTG CCATCATTGA CGAGCTGCGG
GCCCTCGATT GGATCCCCCG CTCAGTGCGA TCACGGGCCC GGGAATACGA CCGAGCTTGT
GAGCACCTCG AAAACACACT GCACCGGGAA CCCACAAGTG GTGAAATTGC CCAACACCTG
GGGGTCCCGG AAAAAGACGT ATGGCAACTT CAGTGGCAAG TGTCCTCGGG GCACGTTATT
GCGCTCGATG AAGTGGTATC CACTGGTGAC CGTGTGGATC AAATCTCTGC CATGGACAGT
GTTCAGGAAA CACTTGCAGT CGATCCTGCT CAATCGTTTG CGCAAGGAGA AATGCGCGAA
ATTCTTGCAC AGGCTGTCGA CCACCTCAAT GAACGCGAAC GTGCCGTGGT GACGCTCTAT
TACTTCCGCT CGATGACATT GAGCGAGATT GGCAAGCTCC TGGGGGTAAC AGAGTCTCGG
GTATCGCAAA TGCACTCAGC AATCATCGTG AAACTGCGTA AGCAATTGAT CGCTTTGGAT
GCAGCACACT AG
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| Protein sequence | MSPLAPTAAN QTTVGTDAPV AEPSDNTNCP RTVRQLWDAY KANPTALGRE ELILHYAPLV
TMIAGRVGMK LPNTVEAADL VSYGMFGLID AIDKFDPSRD IKFETYASTR VRGAIIDELR
ALDWIPRSVR SRAREYDRAC EHLENTLHRE PTSGEIAQHL GVPEKDVWQL QWQVSSGHVI
ALDEVVSTGD RVDQISAMDS VQETLAVDPA QSFAQGEMRE ILAQAVDHLN ERERAVVTLY
YFRSMTLSEI GKLLGVTESR VSQMHSAIIV KLRKQLIALD AAH
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