| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0983 |
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| Symbol | |
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| ID | 8380160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1043443 |
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| End bp | 1045020 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645003724 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003160942 |
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| Protein GI | 256832215 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0432973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGCAT CGCTGTCTGA TCGGCTGACA TCAACTTTTA AGAACCTGCG GAGCAAAGGA
CGCCTCAGTG AGGCGGATAT CGATGCTACG ATCCGCGAGA TTCGTCGTGC TCTGCTGGAT
GCGGATGTCG CGGTGAGTGT GGTTCGTGAC TTTACCGGGG CAGTGCGTGA ACGTGCGTTG
TCCGCTGAGG TCTCGGGGGC TCTTAACCCT GCCCAACAGG TTGTGAAGAT TGTTCACGAT
GAGCTGGTGA CGGTCCTTGG AGGGACTGCT CGTCCTCTTC AGCGCGCCAA AACTGGCCCC
ACAGTCATCA TGTTGGCTGG GTTGCAGGGG GCAGGTAAGA CGACGCTTGC TGGCAAGCTG
GCCGTGCACT TGCGCGAGCA GGGCCACACG CCGATGCTGA TTGCGGCTGA CCTGCAGCGT
CCGAACGCCG TGCAACAGCT GAAAATTGTG GGCGAGCGAG CCGGTGTGCC CGTGTATGCG
CCACACCCCG GCAACCAAGG GGAGGGGGCT ACGCCTGGGT TGTCGGCTGG TGACCCGGTG
GCAATTGCCC GTGCTGGGTA CGAGACCGCA AAAGCGCGTC AGCATGACAC GGTCATTGTC
GACACGGCTG GTCGTCTTGG TGTTGATGCG GAGCTCATGG AGCAGGCCGC TGATATTCGT
GACGCAGTCT CACCGCACGA AATTCTTTTT GTCATCGATG CGATGATCGG CCAAGACGCA
GTGGCTACTG CTCGTGCGTT CGCTGATGGA GTGGGCTTCA CTGGTGTGGT CCTGTCCAAG
CTTGATGGTG ACGCCCGTGG TGGTGCGGCA TTGTCGGTTG CTAAGGTCAC CGGTCAACCG
ATTTTGTTTG CCTCAACTGG TGAGAACCTC ACTGATTTTG AGGTCTTTCA CCCTGATCGT
ATGGCTAACC GTATCCTTGA TATGGGTGAC GTTCTGACTC TCATTGAGCA GGCAGAAAAG
GTCTTCGATC AGCAAGAAGC TGAGCGAATG GCGCAGAAAG TCGCTGACGG TCAGGATTTT
ACGCTCGCGG ATTTCTTGTC TCAGATGCAG CAGCTCAAGA ACATGGGCTC GATGAAGAAA
ATGTTGGGCA TGCTGCCGGG GATGGGGCAG ATGCGCGAAG CGCTCGACAA CTTTGACGAG
CGTGAAGTGA ACCGTATTGA GGCGATCATT CAGTCAATGA CACCTGCAGA ACGGGACAAC
CCGAAAGTCA TCAATGGGTC CAGGCGCGCG CGTATTGCTC GCGGTTCAGG GACCACTGTC
CAGGAAATTA ACCAGTTGCT GCAGCGGTTT GAGGCAGCTC AAAAAATGAT GAAGCAGATG
GCCAAGGCTG GTCCTGGTGT TGGTGGTGGT ATGCCAACGA TGGGGAAGAT GCCTGGCGTG
GGCAAGCGTG CGGGGGCTCG TCAACCGAAG AAGGACAAGA AACTCACCCC ACAACAGCGT
GCTGCGGCCG CCCGGAAGGC AGCTCGTGAC AAGCAGCAAG GGAACAGTTC TGGAGGGGCA
TCGTTCGGTG TGCGCAAGGA CATTGACGCC TCATCAGTGG AATTGCCGTC AGGGTTCGAC
AAGTTTTTAG GCCGGTAA
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| Protein sequence | MFASLSDRLT STFKNLRSKG RLSEADIDAT IREIRRALLD ADVAVSVVRD FTGAVRERAL
SAEVSGALNP AQQVVKIVHD ELVTVLGGTA RPLQRAKTGP TVIMLAGLQG AGKTTLAGKL
AVHLREQGHT PMLIAADLQR PNAVQQLKIV GERAGVPVYA PHPGNQGEGA TPGLSAGDPV
AIARAGYETA KARQHDTVIV DTAGRLGVDA ELMEQAADIR DAVSPHEILF VIDAMIGQDA
VATARAFADG VGFTGVVLSK LDGDARGGAA LSVAKVTGQP ILFASTGENL TDFEVFHPDR
MANRILDMGD VLTLIEQAEK VFDQQEAERM AQKVADGQDF TLADFLSQMQ QLKNMGSMKK
MLGMLPGMGQ MREALDNFDE REVNRIEAII QSMTPAERDN PKVINGSRRA RIARGSGTTV
QEINQLLQRF EAAQKMMKQM AKAGPGVGGG MPTMGKMPGV GKRAGARQPK KDKKLTPQQR
AAAARKAARD KQQGNSSGGA SFGVRKDIDA SSVELPSGFD KFLGR
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