| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0980 |
|---|
| Symbol | |
|---|
| ID | 8380157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1039909 |
|---|
| End bp | 1041183 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645003721 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_003160939 |
|---|
| Protein GI | 256832212 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATT CAGGGATGAC AGCATGGATG CTCATCAGCG CATCGCTCGT GCTTCTCATG
ACCCCGGGTC TTGCGTTCTT CTACGGCGGA ATGGTTCGTG GAAAAAGCGT TTTGAACATG
CTCATGATGT CCTTTGGTGC GATGGGAGTC ATTGGCATCC TGTACGTCTT GTACGGATGG
TCAATGTCTT ACGCGGACCA ATCCATCGGC GGAATATTCG GGAACCCATT CGAACAATGG
GCACTCAACG GAGTGTTCAC ACACGGTGCG GATGGCTTTG AGTTCGCTGT CTCCGATGGC
CTTCCGGTCA TCGTCGACGT CGGATTCCAA GTCACCTTCG CCATGATCAC CACAGCCCTG
ATCTCCGGGG CCATCGCAGA CCGAGTGAAG TACGGTTCCT GGCTTGTCTT CAGCGGGCTC
TGGGTCACGC TCAGCTACTT CCCCCTGGCA CACATGGTTT GGGGACGTGG GCTCCTGTCA
GACGACGGAC CATTCGCATC GATCGCATCG CCCGTCGACT TCGCAGGTGG CACAGTTGTG
CACATCAACG CCGGTATCGC AGCACTTATT CTGGTTCTCA TCATCGGCAA GCGCAAGGGC
TTCGGAACCG AAGCGATGCG GCCCCACAAC CTCCCCTTCG TGATGCTCGG CGCAGCACTC
TTGTGGTTCG GATGGTTCGG GTTCAACGCC GGTTCCGCCT ACGCAGCAGA CGGCATTGCA
GGTCTCGCCT GGGTTAACAC AACCACAGCC ACAGCCGCAG CCATGATCGG ATGGCTCCTC
ACAGAAAAAA TCCGTGACGG ACACGCCACC TCACTCGGCG CAGCATCAGG TGTTGTTGCT
GGTCTGGTCG CCATCACCCC AGCTGCCGGG TCACTCAGCC CCTTCGGGGC AATCATTTTG
GGCCTCATCG CCGGAGTACT GTCCGCACTC GCGGTCGGAC TGAAATACCG GTTTGGTTAC
GACGACTCAC TCGACGTCGT TGGAGTCCAC CTCGTCTCAG GGCTCTGGGG AACAGTAGGA
ATCGGCTTCC TCGCCCTCGA TGGCGGACTG TTCTACGGTG GGGGAGTATC ACTGCTTGCA
GTCCAAGTGA TCATCGCTGT TGTCGCCATG GCCTTCTCTG CCGCCGTCAC AGCGGTCCTT
GCGCTCGGCA TCAAAGCAAC CCTCGGTTGG CGAGTCAGCG AACAAGTTGA GGTCGCAGGA
ATTGACCTCG CAGTCCACGG AGAAAGCGCC TACGAAACCC TCAGCGCACG AGCATACTCG
GAGGTCAAGC CATGA
|
|---|
| Protein sequence | MIDSGMTAWM LISASLVLLM TPGLAFFYGG MVRGKSVLNM LMMSFGAMGV IGILYVLYGW
SMSYADQSIG GIFGNPFEQW ALNGVFTHGA DGFEFAVSDG LPVIVDVGFQ VTFAMITTAL
ISGAIADRVK YGSWLVFSGL WVTLSYFPLA HMVWGRGLLS DDGPFASIAS PVDFAGGTVV
HINAGIAALI LVLIIGKRKG FGTEAMRPHN LPFVMLGAAL LWFGWFGFNA GSAYAADGIA
GLAWVNTTTA TAAAMIGWLL TEKIRDGHAT SLGAASGVVA GLVAITPAAG SLSPFGAIIL
GLIAGVLSAL AVGLKYRFGY DDSLDVVGVH LVSGLWGTVG IGFLALDGGL FYGGGVSLLA
VQVIIAVVAM AFSAAVTAVL ALGIKATLGW RVSEQVEVAG IDLAVHGESA YETLSARAYS
EVKP
|
|---|
| |