| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0974 |
|---|
| Symbol | |
|---|
| ID | 8380151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 1032783 |
|---|
| End bp | 1033535 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645003715 |
|---|
| Product | dihydroxyacetone kinase, phosphotransfer subunit |
|---|
| Protein accession | YP_003160933 |
|---|
| Protein GI | 256832206 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3412] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family
[TIGR02364] dihydroxyacetone kinase, phosphotransfer subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.806811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATG ATGTTGCCCT TGTCTTTGTG TCCCATAGCC CTCACCTTGC CCAAGGCATC
GTGGACTTAT GTGCGCAAAT GGCGCCAGAC GTTGTCATGG TTCCTGCTGG AGGACTTGAG
GATGGATCGT TGGGCACATC TTTTGACACG ATTTCTGATG CGATTGAACG AGCTGCGGGA
TTTGTGGAAG ACCATGATGG TCCGTTGCGT GACGTTGTTG TTTTCGCGGA CCTGGGGTCT
GCTGTGCTGT CGACTCAGTC AGTGCTGGAG TTCCTTCCGG CTGAACTTGA TGGACGGATC
ACGCTGGCGC AGGCTCCTTT TGTCGAGGGT GGGGTTGCCG GCAGTGTAGC CGCAGCCCAA
GGTGCAGGAG CAGCTGAAGT GGTCCGCCGG GCCCACCAAG CGGCCTCGGA GCTGCTCACT
GACTTAGCTC ACGACCCGAC ACCTGCAGCT GAGATAACCG AGGAGCCAGG GACTGTGTCC
TCGTCAGTAA CTGTCAGCAA CGCCTTAGGC TTACACGCGC GTCCTGCGGC AGTTCTTGCT
CGCCTCATCG CTGGTTTTGA TGCCCAAGTG ACACTGAACG GAGCGAACGG CAGCTCGGTG
ATTGACATCA TGAAACTCGG GGCAACCGGG GGACAAGCCC TCACCGTGGT GGCGCAAGGC
AACCAAGCGA AACAAGCACA CGATGCAGTG GTTGAGGCCA TAGCTGGTGG GTTCGGAGAG
GCAGAGGTGT CATCCGATAG TCTTGGTCAG TGA
|
|---|
| Protein sequence | MTHDVALVFV SHSPHLAQGI VDLCAQMAPD VVMVPAGGLE DGSLGTSFDT ISDAIERAAG
FVEDHDGPLR DVVVFADLGS AVLSTQSVLE FLPAELDGRI TLAQAPFVEG GVAGSVAAAQ
GAGAAEVVRR AHQAASELLT DLAHDPTPAA EITEEPGTVS SSVTVSNALG LHARPAAVLA
RLIAGFDAQV TLNGANGSSV IDIMKLGATG GQALTVVAQG NQAKQAHDAV VEAIAGGFGE
AEVSSDSLGQ
|
|---|
| |