Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0967 |
Symbol | |
ID | 8380144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1023425 |
End bp | 1024492 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645003708 |
Product | periplasmic binding protein |
Protein accession | YP_003160926 |
Protein GI | 256832199 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGCGT CTTTCTTCCC TGTTCCTTTG TTGTACCGCC CTCGTGGTGG TGTGCGAGCT GTCGTGGGTG CTTCACTGTG CGCCGTGCTG GTAGCAAGTT GCTCTGCCCC TTCACAGCCG TCACCAGACT CACCCACCAC AAACGCATCG TCGAGCCAAA CACGGGAAGC CACCACTTAC CCCCTGACTG TGGACAATTG TGGGACGACC GCCACATTCG ATTCAGTACC CGAGCGCGTC GTCACCCTCA AATCCTCCAC TACGGAACTG CTCCTTGCCC TCGGACGTGG TGACCGGATC GTTGCAACAA GCTATCTTGA CGGCCCAGTT GCCCCCTGGC TCGAGGATGA GGCCGCACAA GTACCCGCCG TGTCGGCACC ACTTGATGAA CGTCTCCCAT CATTGGAAAA AGTCTTAGAA ACCGAACCAG ATCTGATTTT TGCAGGCTGG GAATCAATGG TCACCACAGA AGGACTAGCC GATCGCGACC GACTGACCCA ACTGGGGGTG AACACTCTTG TCGCACCATC CGCCTGCAAA GAAGACGGGT ACCGGCCTGA TCCCTTGACC TGGGAGTCGT TAGCACAAGA GATCACAACA GTCGGCACAA TATTCGATGC ACACAGTGAG GCACAAAGCC TGGTCGACAC CATGAATGAA CAACTGGCAG CGATCTCTCC CGATAGTCGT GGACTCAGCG CCCTATGGTT TTCCTCAGGC TCTGACACCC CATTCGTCGG CGGAGGTTCA GGTTCAGCTC AGCTCGTCAT GGATACCGTA GGACTGCGTA ACATCGGATC AGACATTGAC GACACCTGGG GACCCATGTC TTGGGAAGCA ATCATTGATG CTAACCCTGA CGTCATTGTC CTCGTGGATT CGTCATGGTC CTCAGCGCAA AAAAAGAAGG ACATCTTGAC AAGTCACCCA GTGGCATCAA CACTCGACGC GGTTGTGAAC GACCGTTATC TTGTCATTGA CTTCCCGCCC ACAGAACCAG GTGTGCGTAC CGCGGATGGA GCGGTGGCGC TCGCAGACCA ACTCGCGGCC CTGACCGTGG AGGACTGA
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Protein sequence | MSASFFPVPL LYRPRGGVRA VVGASLCAVL VASCSAPSQP SPDSPTTNAS SSQTREATTY PLTVDNCGTT ATFDSVPERV VTLKSSTTEL LLALGRGDRI VATSYLDGPV APWLEDEAAQ VPAVSAPLDE RLPSLEKVLE TEPDLIFAGW ESMVTTEGLA DRDRLTQLGV NTLVAPSACK EDGYRPDPLT WESLAQEITT VGTIFDAHSE AQSLVDTMNE QLAAISPDSR GLSALWFSSG SDTPFVGGGS GSAQLVMDTV GLRNIGSDID DTWGPMSWEA IIDANPDVIV LVDSSWSSAQ KKKDILTSHP VASTLDAVVN DRYLVIDFPP TEPGVRTADG AVALADQLAA LTVED
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