Gene Jden_0967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0967 
Symbol 
ID8380144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1023425 
End bp1024492 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content56% 
IMG OID645003708 
Productperiplasmic binding protein 
Protein accessionYP_003160926 
Protein GI256832199 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGCGT CTTTCTTCCC TGTTCCTTTG TTGTACCGCC CTCGTGGTGG TGTGCGAGCT 
GTCGTGGGTG CTTCACTGTG CGCCGTGCTG GTAGCAAGTT GCTCTGCCCC TTCACAGCCG
TCACCAGACT CACCCACCAC AAACGCATCG TCGAGCCAAA CACGGGAAGC CACCACTTAC
CCCCTGACTG TGGACAATTG TGGGACGACC GCCACATTCG ATTCAGTACC CGAGCGCGTC
GTCACCCTCA AATCCTCCAC TACGGAACTG CTCCTTGCCC TCGGACGTGG TGACCGGATC
GTTGCAACAA GCTATCTTGA CGGCCCAGTT GCCCCCTGGC TCGAGGATGA GGCCGCACAA
GTACCCGCCG TGTCGGCACC ACTTGATGAA CGTCTCCCAT CATTGGAAAA AGTCTTAGAA
ACCGAACCAG ATCTGATTTT TGCAGGCTGG GAATCAATGG TCACCACAGA AGGACTAGCC
GATCGCGACC GACTGACCCA ACTGGGGGTG AACACTCTTG TCGCACCATC CGCCTGCAAA
GAAGACGGGT ACCGGCCTGA TCCCTTGACC TGGGAGTCGT TAGCACAAGA GATCACAACA
GTCGGCACAA TATTCGATGC ACACAGTGAG GCACAAAGCC TGGTCGACAC CATGAATGAA
CAACTGGCAG CGATCTCTCC CGATAGTCGT GGACTCAGCG CCCTATGGTT TTCCTCAGGC
TCTGACACCC CATTCGTCGG CGGAGGTTCA GGTTCAGCTC AGCTCGTCAT GGATACCGTA
GGACTGCGTA ACATCGGATC AGACATTGAC GACACCTGGG GACCCATGTC TTGGGAAGCA
ATCATTGATG CTAACCCTGA CGTCATTGTC CTCGTGGATT CGTCATGGTC CTCAGCGCAA
AAAAAGAAGG ACATCTTGAC AAGTCACCCA GTGGCATCAA CACTCGACGC GGTTGTGAAC
GACCGTTATC TTGTCATTGA CTTCCCGCCC ACAGAACCAG GTGTGCGTAC CGCGGATGGA
GCGGTGGCGC TCGCAGACCA ACTCGCGGCC CTGACCGTGG AGGACTGA
 
Protein sequence
MSASFFPVPL LYRPRGGVRA VVGASLCAVL VASCSAPSQP SPDSPTTNAS SSQTREATTY 
PLTVDNCGTT ATFDSVPERV VTLKSSTTEL LLALGRGDRI VATSYLDGPV APWLEDEAAQ
VPAVSAPLDE RLPSLEKVLE TEPDLIFAGW ESMVTTEGLA DRDRLTQLGV NTLVAPSACK
EDGYRPDPLT WESLAQEITT VGTIFDAHSE AQSLVDTMNE QLAAISPDSR GLSALWFSSG
SDTPFVGGGS GSAQLVMDTV GLRNIGSDID DTWGPMSWEA IIDANPDVIV LVDSSWSSAQ
KKKDILTSHP VASTLDAVVN DRYLVIDFPP TEPGVRTADG AVALADQLAA LTVED